Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   EB817_RS07960 Genome accession   NZ_CP033336
Coordinates   1550909..1551388 (-) Length   159 a.a.
NCBI ID   WP_331852100.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY165     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1545909..1556388
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EB817_RS07940 (EB817_07955) - 1546078..1546683 (-) 606 WP_002982799.1 response regulator transcription factor -
  EB817_RS07945 (EB817_07960) - 1546664..1548226 (-) 1563 WP_111688349.1 hypothetical protein -
  EB817_RS07950 (EB817_07965) - 1548266..1550173 (-) 1908 WP_129304909.1 FtsX-like permease family protein -
  EB817_RS07955 (EB817_07970) - 1550175..1550912 (-) 738 WP_014407842.1 ABC transporter ATP-binding protein -
  EB817_RS07960 (EB817_07975) rcrQ 1550909..1551388 (-) 480 WP_331852100.1 ATP-binding cassette domain-containing protein Regulator
  EB817_RS07965 (EB817_07980) - 1551444..1553069 (-) 1626 WP_129304910.1 DUF4135 domain-containing protein -
  EB817_RS07970 (EB817_07985) - 1553153..1553308 (-) 156 WP_011889147.1 type A2 lanthipeptide -
  EB817_RS07975 (EB817_07990) lacG 1553812..1555218 (-) 1407 WP_129304911.1 6-phospho-beta-galactosidase -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18573.42 Da        Isoelectric Point: 7.8093

>NTDB_id=283115 EB817_RS07960 WP_331852100.1 1550909..1551388(-) (rcrQ) [Streptococcus pyogenes strain TSPY165]
MFDGDVMYNILLGRESVTEKQVIEICKRVSLYEDIRSMPMKFHTPLFRDNPSLSGGQKQRISLARELVTTPRILVLDEPT
SALDVKTKRIIQKNVEALHCTRVLVTHRLNTVEKADKILIMDNGKIIDYGSHHCLYKNNEYYRDLYDSYMNNYQEEGMK

Nucleotide


Download         Length: 480 bp        

>NTDB_id=283115 EB817_RS07960 WP_331852100.1 1550909..1551388(-) (rcrQ) [Streptococcus pyogenes strain TSPY165]
ATATTTGATGGGGATGTGATGTATAACATTTTGCTAGGAAGAGAATCTGTTACAGAAAAACAAGTTATTGAAATCTGTAA
AAGGGTATCACTATATGAGGATATCAGGAGTATGCCAATGAAGTTTCATACCCCACTTTTTCGAGACAATCCATCACTAT
CTGGGGGGCAAAAACAACGAATTTCTCTAGCAAGAGAGTTAGTAACTACCCCTAGAATCTTAGTTCTTGATGAACCTACA
TCAGCTTTAGATGTAAAAACTAAAAGAATAATCCAAAAAAATGTTGAGGCTTTACATTGTACGAGGGTTTTGGTTACCCA
TAGACTTAATACAGTTGAAAAAGCTGATAAGATTTTAATAATGGATAATGGGAAAATTATTGACTATGGTAGTCATCATT
GTTTATATAAAAATAATGAGTACTATCGTGATTTATATGATTCGTACATGAACAACTATCAGGAGGAAGGGATGAAATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(21-81)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

38.667

94.34

0.365