Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   C7M20_RS14920 Genome accession   NZ_CP028206
Coordinates   3053191..3054075 (-) Length   294 a.a.
NCBI ID   WP_032865221.1    Uniprot ID   -
Organism   Bacillus velezensis strain SRCM102742     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3048191..3059075
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M20_RS14885 (C7M20_03005) - 3048398..3048874 (+) 477 WP_007408672.1 Na+/H+ antiporter subunit E -
  C7M20_RS14890 (C7M20_03006) - 3048874..3049158 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  C7M20_RS14895 (C7M20_03007) mnhG 3049142..3049516 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  C7M20_RS14900 (C7M20_03008) - 3049556..3049939 (-) 384 WP_012118312.1 hotdog fold thioesterase -
  C7M20_RS14905 (C7M20_03009) comA 3049961..3050605 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  C7M20_RS14910 (C7M20_03010) comP 3050686..3052995 (-) 2310 WP_099567053.1 histidine kinase Regulator
  C7M20_RS14915 (C7M20_03011) - 3053015..3053191 (-) 177 WP_007408675.1 competence pheromone ComX -
  C7M20_RS14920 (C7M20_03012) comQ 3053191..3054075 (-) 885 WP_032865221.1 polyprenyl synthetase family protein Regulator
  C7M20_RS14925 (C7M20_03013) degQ 3054260..3054400 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  C7M20_RS14930 (C7M20_03014) - 3054865..3055206 (+) 342 WP_099567054.1 hypothetical protein -
  C7M20_RS14935 (C7M20_03015) - 3055213..3056436 (-) 1224 WP_007408678.1 EAL and HDOD domain-containing protein -
  C7M20_RS14940 (C7M20_03016) - 3056566..3058032 (-) 1467 WP_020954301.1 nicotinate phosphoribosyltransferase -
  C7M20_RS14945 (C7M20_03017) - 3058050..3058601 (-) 552 WP_003152033.1 cysteine hydrolase family protein -

Sequence


Protein


Download         Length: 294 a.a.        Molecular weight: 33789.75 Da        Isoelectric Point: 6.1701

>NTDB_id=282668 C7M20_RS14920 WP_032865221.1 3053191..3054075(-) (comQ) [Bacillus velezensis strain SRCM102742]
MKSIIEQNIFNQHLLQLLLGFVESRKYLTFAESALLHYEVFGGRDFKTAEKLAAGIEILTLSADIIDDLEDEDNKQALWM
KIDRSEALSAAFSLYTAGLQGINSINMNPFILSYILKYTQDAMQGQHDDIINKPEKEDESLEVIRLKCGSLFALSNVAGT
MLATGKYNETVETYSYYKGMFEQIYSDYLALFSSKRSDILKDKHTLINLYLKRLFNEPSEKLVRMFSHRETHLKFISDKN
NFIQTLTDAGVTQYVSVLHQLYKQKCENAIEKLNLETSKIDKLKKYVVNRGIEV

Nucleotide


Download         Length: 885 bp        

>NTDB_id=282668 C7M20_RS14920 WP_032865221.1 3053191..3054075(-) (comQ) [Bacillus velezensis strain SRCM102742]
ATGAAGAGTATAATAGAGCAAAACATATTCAATCAACATTTACTACAGCTTCTTCTTGGGTTTGTTGAATCCAGAAAATA
TTTAACCTTTGCTGAATCTGCTTTATTGCATTATGAAGTTTTTGGCGGAAGGGATTTTAAGACTGCTGAGAAACTTGCGG
CGGGAATTGAAATTCTTACGCTTTCCGCCGATATTATTGATGATCTTGAAGATGAAGATAACAAACAAGCTCTTTGGATG
AAGATAGACCGTTCAGAAGCTTTAAGCGCAGCTTTTTCATTATACACAGCAGGGCTGCAGGGGATTAATTCAATTAACAT
GAATCCTTTTATTCTTTCTTACATACTGAAATATACACAAGACGCTATGCAAGGACAACACGATGATATAATCAATAAGC
CAGAGAAAGAAGATGAAAGTTTAGAGGTCATTAGATTAAAATGCGGGAGTCTATTCGCTCTATCCAATGTGGCAGGTACT
ATGTTAGCAACTGGAAAGTATAATGAAACTGTTGAAACGTATTCCTATTACAAAGGAATGTTTGAACAGATATATAGTGA
TTATCTGGCTCTTTTCAGCTCTAAACGCAGTGATATTTTAAAAGATAAACACACGTTAATCAACTTGTACCTTAAGAGGC
TGTTTAACGAGCCTTCTGAAAAATTGGTTCGTATGTTTTCTCATAGAGAAACACACCTTAAGTTTATATCTGATAAAAAC
AATTTTATTCAGACATTAACTGATGCAGGTGTTACTCAGTATGTTTCAGTTTTACACCAATTGTATAAGCAAAAATGTGA
AAATGCTATAGAGAAACTAAATCTTGAAACCAGTAAAATAGATAAATTGAAAAAATATGTAGTTAATAGGGGGATTGAAG
TATAA

Domains


Predicted by InterproScan.

(35-229)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

62.456

96.939

0.605


Multiple sequence alignment