Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | LPC_RS10030 | Genome accession | NC_009494 |
| Coordinates | 2227861..2228274 (-) | Length | 137 a.a. |
| NCBI ID | WP_011946811.1 | Uniprot ID | A0AAN5R315 |
| Organism | Legionella pneumophila str. Corby | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2222861..2233274
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPC_RS10020 (LPC_1366) | letS | 2223790..2226522 (+) | 2733 | WP_011946809.1 | two-component system sensor histidine kinase LetS | Regulator |
| LPC_RS10025 (LPC_1367) | - | 2226620..2227864 (+) | 1245 | WP_011946810.1 | 6-phosphofructokinase | - |
| LPC_RS10030 (LPC_1368) | pilA2 | 2227861..2228274 (-) | 414 | WP_011946811.1 | pilin | Machinery gene |
| LPC_RS10035 (LPC_1369) | pilA2 | 2228476..2228889 (-) | 414 | WP_011946812.1 | pilin | Machinery gene |
| LPC_RS10040 (LPC_1370) | - | 2229192..2229509 (+) | 318 | WP_011946813.1 | BolA family protein | - |
| LPC_RS10045 (LPC_1371) | - | 2229584..2231005 (+) | 1422 | WP_011946814.1 | APC family permease | - |
| LPC_RS10050 (LPC_1372) | - | 2231136..2232566 (-) | 1431 | WP_011946815.1 | cellulase family glycosylhydrolase | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 14681.10 Da Isoelectric Point: 7.7736
>NTDB_id=28241 LPC_RS10030 WP_011946811.1 2227861..2228274(-) (pilA2) [Legionella pneumophila str. Corby]
MRTKGFTLIELMIVAAILGILLAIAFPAYQDYTIRARVAEGLEKASFAKLAVAEKILIDNILPLNQADTSYSSPIPTDSV
ASIAIGNQGIITITYTANAGNGTITMVPTIDATNRILTWDCTGGTLISKYRPAYCRP
MRTKGFTLIELMIVAAILGILLAIAFPAYQDYTIRARVAEGLEKASFAKLAVAEKILIDNILPLNQADTSYSSPIPTDSV
ASIAIGNQGIITITYTANAGNGTITMVPTIDATNRILTWDCTGGTLISKYRPAYCRP
Nucleotide
Download Length: 414 bp
>NTDB_id=28241 LPC_RS10030 WP_011946811.1 2227861..2228274(-) (pilA2) [Legionella pneumophila str. Corby]
ATGAGAACGAAAGGATTTACTTTAATCGAGCTGATGATAGTTGCTGCTATCCTTGGGATTCTACTTGCCATCGCTTTTCC
AGCCTATCAGGACTATACCATCAGAGCGCGGGTGGCTGAAGGATTGGAAAAGGCTTCATTTGCAAAATTAGCCGTTGCCG
AGAAGATTTTGATAGATAATATATTGCCATTAAATCAAGCAGATACTAGTTACTCAAGTCCCATACCCACAGACAGTGTC
GCCTCTATAGCTATTGGCAATCAAGGCATAATTACCATTACCTACACGGCAAATGCAGGTAATGGCACTATTACAATGGT
TCCTACAATAGATGCCACTAACAGAATACTCACTTGGGATTGCACTGGTGGTACCCTGATTAGTAAATATCGTCCAGCCT
ACTGCCGCCCTTAA
ATGAGAACGAAAGGATTTACTTTAATCGAGCTGATGATAGTTGCTGCTATCCTTGGGATTCTACTTGCCATCGCTTTTCC
AGCCTATCAGGACTATACCATCAGAGCGCGGGTGGCTGAAGGATTGGAAAAGGCTTCATTTGCAAAATTAGCCGTTGCCG
AGAAGATTTTGATAGATAATATATTGCCATTAAATCAAGCAGATACTAGTTACTCAAGTCCCATACCCACAGACAGTGTC
GCCTCTATAGCTATTGGCAATCAAGGCATAATTACCATTACCTACACGGCAAATGCAGGTAATGGCACTATTACAATGGT
TCCTACAATAGATGCCACTAACAGAATACTCACTTGGGATTGCACTGGTGGTACCCTGATTAGTAAATATCGTCCAGCCT
ACTGCCGCCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila str. Paris |
68.613 |
100 |
0.686 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
67.883 |
100 |
0.679 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
44.444 |
100 |
0.526 |
| comP | Acinetobacter baylyi ADP1 |
45.517 |
100 |
0.482 |
| pilA/pilA1 | Eikenella corrodens VA1 |
38.065 |
100 |
0.431 |
| pilA/pilAI | Pseudomonas stutzeri DSM 10701 |
38.406 |
100 |
0.387 |
| pilA/pilAII | Pseudomonas stutzeri DSM 10701 |
36.957 |
100 |
0.372 |