Detailed information NTG0279470

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: D9C14_RS09815
• Genome accession: NZ_CP032860
• Coordinates: 1858723..1859844 (+)
• Length: 373 a.a.
• NCBI ID: WP_015715201.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain SSJ-1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1853723..1864844

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D9C14_RS09790 (D9C14_09790)	ycdA	1853728..1854792 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
D9C14_RS09795 (D9C14_09795)	-	1854815..1854946 (-)	132	WP_003246334.1	hypothetical protein	-
D9C14_RS09800 (D9C14_09800)	ycdB	1855120..1856541 (+)	1422	WP_038427323.1	YcdB/YcdC domain-containing protein	-
D9C14_RS09805 (D9C14_09805)	ycdC	1856728..1858089 (+)	1362	WP_038428124.1	YcdB/YcdC domain-containing protein	-
D9C14_RS09810 (D9C14_09810)	cwlK	1858097..1858600 (-)	504	WP_029317221.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
D9C14_RS09815 (D9C14_09815)	rapF	1858723..1859844 (+)	1122	WP_015715201.1	response regulator aspartate phosphatase RapJ	Regulator
D9C14_RS09820 (D9C14_09820)	ycdF	1859951..1860727 (+)	777	WP_015382686.1	SDR family oxidoreductase	-
D9C14_RS09825 (D9C14_09825)	ycdG	1860752..1862437 (+)	1686	WP_038427325.1	alpha-glucosidase	-
D9C14_RS09830 (D9C14_09830)	znuA	1862625..1863584 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
D9C14_RS09835 (D9C14_09835)	znuC	1863639..1864334 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44400.29 Da
• Isoelectric Point: 4.8344

>NTDB_id=279470 D9C14_RS09815 WP_015715201.1 1858723..1859844(+) (rapF) [Bacillus subtilis subsp. subtilis strain SSJ-1]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=279470 D9C14_RS09815 WP_015715201.1 1858723..1859844(+) (rapF) [Bacillus subtilis subsp. subtilis strain SSJ-1]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATATGATTTAGAAGATATGGAAGAGAATCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAGGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCTGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCAGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405