Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | FORC77_RS01680 | Genome accession | NZ_CP027030 |
| Coordinates | 347019..347609 (+) | Length | 196 a.a. |
| NCBI ID | WP_131069608.1 | Uniprot ID | - |
| Organism | Vibrio vulnificus strain FORC_077 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 342019..352609
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FORC77_RS01665 (FORC77_0304) | oxyR | 342399..343298 (+) | 900 | WP_011079350.1 | DNA-binding transcriptional regulator OxyR | - |
| FORC77_RS01670 (FORC77_0305) | - | 343369..345882 (-) | 2514 | WP_131069607.1 | PBP1A family penicillin-binding protein | - |
| FORC77_RS01675 (FORC77_0306) | pilM | 346022..347029 (+) | 1008 | WP_017419656.1 | type IV pilus assembly protein PilM | Machinery gene |
| FORC77_RS01680 (FORC77_0307) | pilN | 347019..347609 (+) | 591 | WP_131069608.1 | PilN domain-containing protein | Machinery gene |
| FORC77_RS01685 (FORC77_0308) | pilO | 347602..348192 (+) | 591 | WP_011079354.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| FORC77_RS01690 (FORC77_0309) | pilP | 348182..348694 (+) | 513 | WP_011079355.1 | pilus assembly protein PilP | Machinery gene |
| FORC77_RS01695 (FORC77_0310) | pilQ | 348708..350492 (+) | 1785 | WP_011079356.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| FORC77_RS01700 (FORC77_0311) | aroK | 350694..351212 (+) | 519 | WP_011079357.1 | shikimate kinase AroK | - |
| FORC77_RS01705 (FORC77_0312) | aroB | 351245..352336 (+) | 1092 | WP_061058951.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 22672.96 Da Isoelectric Point: 8.4848
>NTDB_id=274576 FORC77_RS01680 WP_131069608.1 347019..347609(+) (pilN) [Vibrio vulnificus strain FORC_077]
MQHKINLLPWREHKREEHKRRFVSLVALGALIAVGIQWGIGQYFSYQQRLQQERLDYLTHYIAQLDKRIQAMNIAKEEHS
QILARLKVVESLQAERNKTTAFMNLMTELIPEGVYVDKIKMNTNDVELAGISDSTARLATMLDNLERSTFLKEVEMHSIV
HDKKRFGKSFQTFTVSFVFDEHADSANTLAKEGNHG
MQHKINLLPWREHKREEHKRRFVSLVALGALIAVGIQWGIGQYFSYQQRLQQERLDYLTHYIAQLDKRIQAMNIAKEEHS
QILARLKVVESLQAERNKTTAFMNLMTELIPEGVYVDKIKMNTNDVELAGISDSTARLATMLDNLERSTFLKEVEMHSIV
HDKKRFGKSFQTFTVSFVFDEHADSANTLAKEGNHG
Nucleotide
Download Length: 591 bp
>NTDB_id=274576 FORC77_RS01680 WP_131069608.1 347019..347609(+) (pilN) [Vibrio vulnificus strain FORC_077]
ATGCAGCATAAGATCAACCTGTTACCTTGGCGTGAACACAAGCGTGAGGAGCATAAACGTCGTTTTGTCAGTCTGGTCGC
ATTAGGTGCCCTGATCGCGGTCGGTATTCAGTGGGGCATTGGCCAGTACTTTTCATACCAACAACGTTTGCAGCAAGAGC
GTCTCGATTATCTTACCCACTATATCGCACAGTTGGATAAGCGTATCCAAGCGATGAACATTGCCAAGGAAGAGCATAGC
CAGATCCTCGCTCGACTCAAGGTTGTCGAGTCGCTTCAAGCGGAACGCAACAAAACCACCGCATTTATGAACTTGATGAC
GGAACTGATCCCAGAGGGGGTGTATGTCGACAAGATCAAAATGAACACCAACGACGTTGAGTTGGCTGGCATAAGCGATA
GTACCGCTCGACTCGCCACCATGTTGGATAATTTGGAACGTTCCACCTTTCTAAAAGAAGTGGAAATGCATTCAATTGTT
CATGACAAGAAGCGTTTTGGTAAGAGCTTCCAGACGTTTACCGTCTCTTTTGTGTTTGATGAACATGCCGATTCTGCCAA
TACGTTGGCCAAGGAGGGGAATCATGGCTAG
ATGCAGCATAAGATCAACCTGTTACCTTGGCGTGAACACAAGCGTGAGGAGCATAAACGTCGTTTTGTCAGTCTGGTCGC
ATTAGGTGCCCTGATCGCGGTCGGTATTCAGTGGGGCATTGGCCAGTACTTTTCATACCAACAACGTTTGCAGCAAGAGC
GTCTCGATTATCTTACCCACTATATCGCACAGTTGGATAAGCGTATCCAAGCGATGAACATTGCCAAGGAAGAGCATAGC
CAGATCCTCGCTCGACTCAAGGTTGTCGAGTCGCTTCAAGCGGAACGCAACAAAACCACCGCATTTATGAACTTGATGAC
GGAACTGATCCCAGAGGGGGTGTATGTCGACAAGATCAAAATGAACACCAACGACGTTGAGTTGGCTGGCATAAGCGATA
GTACCGCTCGACTCGCCACCATGTTGGATAATTTGGAACGTTCCACCTTTCTAAAAGAAGTGGAAATGCATTCAATTGTT
CATGACAAGAAGCGTTTTGGTAAGAGCTTCCAGACGTTTACCGTCTCTTTTGTGTTTGATGAACATGCCGATTCTGCCAA
TACGTTGGCCAAGGAGGGGAATCATGGCTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Vibrio campbellii strain DS40M4 |
67.956 |
92.347 |
0.628 |
| pilN | Vibrio cholerae strain A1552 |
62.712 |
90.306 |
0.566 |