Detailed information NTG0271748

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: NLP_RS23015
• Genome accession: NZ_CP026692
• Coordinates: 5222924..5224030 (+)
• Length: 368 a.a.
• NCBI ID: WP_104908379.1
• Uniprot ID: -
• Organism: Nostoc sp. 'Lobaria pulmonaria (5183) cyanobiont' strain 5183
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5217924..5229030

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NLP_RS22985 (NLP_4463)	-	5218368..5218880 (-)	513	WP_104908375.1	TIGR02652 family protein	-
NLP_RS22995 (NLP_4464)	-	5219120..5219647 (+)	528	WP_104908376.1	gamma carbonic anhydrase family protein	-
NLP_RS23000 (NLP_4465)	-	5219821..5219946 (+)	126	WP_104908377.1	photosystem II protein Y	-
NLP_RS23005 (NLP_4466)	-	5220166..5221464 (+)	1299	WP_104909989.1	folylpolyglutamate synthase/dihydrofolate synthase family protein	-
NLP_RS23010 (NLP_4467)	-	5221473..5222771 (-)	1299	WP_104908378.1	sugar ABC transporter substrate-binding protein	-
NLP_RS23015 (NLP_4468)	pilM	5222924..5224030 (+)	1107	WP_104908379.1	type IV pilus biogenesis protein PilM	Machinery gene
NLP_RS23020 (NLP_4469)	-	5224035..5224811 (+)	777	WP_104908380.1	PilN domain-containing protein	-
NLP_RS23025 (NLP_4470)	-	5224808..5225572 (+)	765	WP_104908381.1	pilus assembly protein PilO	-
NLP_RS23030 (NLP_4471)	-	5225858..5228044 (+)	2187	WP_104908382.1	type IV pilus secretin family protein	-
NLP_RS23035 (NLP_4472)	-	5228659..5228943 (+)	285	WP_010998076.1	HU family DNA-binding protein	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 40411.43 Da
• Isoelectric Point: 4.4451

>NTDB_id=271748 NLP_RS23015 WP_104908379.1 5222924..5224030(+) (pilM) [Nostoc sp. 'Lobaria pulmonaria (5183) cyanobiont' strain 5183]
MVKSFNSLFGKSKKGVGIELAPERVNVVQLRKQGQGLKLEIYTSVAVPEGIVIDGQISDPPAMAQLIQQALAESKIKTSR
VATGVPGRDSIVRIIPVPAELDDKELREMVLNHEAGLYLPYPREEADVDYQKLGYFVDEDGIEKVHVLLVATRKEITDTY
ISTFEQAGLQIDVLEINSFALIRTIREQLRQFGPQEAAVLVDIEFDSTEIAIIVNGVPQFSRTVPIGTYQMQTALARAMS
LPTSRDMELLHGMVIPATPIDGGKTGVTELDPSMAAILRVLGELTDELRRSIDFYLNQSENLEVAQILLAGPGGGLQQLD
EFFTQRLSLPTTQIDPIGSLSLEVDTDKYPQVQRSGLAIVLGLGMREV

Nucleotide

• Length: 1107 bp

>NTDB_id=271748 NLP_RS23015 WP_104908379.1 5222924..5224030(+) (pilM) [Nostoc sp. 'Lobaria pulmonaria (5183) cyanobiont' strain 5183]
GTGGTAAAAAGCTTCAATAGTCTGTTTGGCAAATCGAAAAAAGGGGTAGGCATTGAACTTGCTCCCGAACGGGTAAATGT
TGTTCAGCTACGCAAGCAGGGTCAAGGCTTGAAACTAGAAATCTATACATCGGTAGCAGTTCCAGAAGGGATAGTTATCG
ATGGTCAAATCAGCGACCCTCCAGCAATGGCGCAATTAATCCAGCAGGCGCTAGCTGAGAGCAAAATCAAAACTTCTCGC
GTTGCTACTGGTGTCCCAGGACGAGATTCTATCGTTCGGATTATACCAGTGCCAGCAGAATTAGATGATAAAGAACTGCG
AGAAATGGTGCTGAACCATGAAGCAGGTTTGTATTTACCCTATCCTCGTGAAGAGGCTGATGTAGATTATCAGAAACTTG
GGTATTTTGTAGATGAAGATGGCATTGAAAAAGTACACGTACTCCTAGTTGCCACCCGCAAGGAGATAACGGATACCTAT
ATAAGTACCTTCGAGCAAGCAGGATTACAAATTGATGTTTTAGAAATTAACAGTTTTGCTCTAATTCGGACTATTCGTGA
ACAACTGCGACAATTTGGGCCGCAAGAAGCAGCAGTACTAGTTGATATCGAGTTCGATAGTACAGAAATCGCCATCATCG
TTAACGGAGTACCGCAATTTTCGCGCACAGTCCCAATCGGGACTTATCAAATGCAAACTGCCTTAGCAAGGGCAATGAGC
TTACCTACATCACGAGATATGGAACTGTTACACGGAATGGTTATTCCTGCAACTCCCATAGACGGCGGTAAAACTGGCGT
TACCGAACTCGATCCTAGCATGGCTGCCATATTGAGAGTCTTGGGAGAATTAACGGATGAACTGCGCCGTTCCATCGATT
TTTACCTGAATCAAAGTGAAAATTTGGAGGTAGCGCAGATTTTATTAGCTGGGCCAGGAGGTGGACTTCAACAGTTAGAT
GAATTTTTTACTCAACGATTGAGTTTGCCAACTACCCAAATAGATCCAATCGGGTCTTTATCTTTGGAAGTTGACACTGA
TAAATATCCACAGGTACAACGCTCTGGTCTGGCGATTGTACTCGGTCTAGGAATGCGGGAGGTGTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (283-367)

• Type IV pilus assembly protein PilM; (PilM_2) (17-238)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Synechocystis sp. PCC 6803	67.03	99.728	0.668