Detailed information NTG0271530

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: BL14DL4_RS13010
• Genome accession: NZ_CP026673
• Coordinates: 2449856..2450968 (+)
• Length: 370 a.a.
• NCBI ID: WP_003178089.1
• Uniprot ID: A0A415J9T0
• Organism: Bacillus licheniformis strain 14ADL4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2444856..2455968

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BL14DL4_RS12985 (BL14DL4_02595)	rnpA	2445585..2445944 (-)	360	WP_003178055.1	ribonuclease P protein component	-
BL14DL4_RS12990	rpmH	2446029..2446163 (-)	135	WP_003178075.1	50S ribosomal protein L34	-
BL14DL4_RS12995 (BL14DL4_02596)	dnaA	2446803..2448143 (+)	1341	WP_003178077.1	chromosomal replication initiator protein DnaA	-
BL14DL4_RS13000 (BL14DL4_02597)	dnaN	2448320..2449456 (+)	1137	WP_003178080.1	DNA polymerase III subunit beta	-
BL14DL4_RS13005 (BL14DL4_02598)	yaaA	2449624..2449839 (+)	216	WP_003178084.1	S4 domain-containing protein YaaA	-
BL14DL4_RS13010 (BL14DL4_02599)	recF	2449856..2450968 (+)	1113	WP_003178089.1	DNA replication/repair protein RecF	Machinery gene
BL14DL4_RS13015	remB	2450986..2451228 (+)	243	WP_003178090.1	extracellular matrix regulator RemB	-
BL14DL4_RS13020 (BL14DL4_02600)	gyrB	2451288..2453201 (+)	1914	WP_009330043.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
BL14DL4_RS13025 (BL14DL4_02601)	gyrA	2453392..2455860 (+)	2469	WP_003178095.1	DNA gyrase subunit A	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42482.33 Da
• Isoelectric Point: 6.7331

>NTDB_id=271530 BL14DL4_RS13010 WP_003178089.1 2449856..2450968(+) (recF) [Bacillus licheniformis strain 14ADL4]
MYIQNLTLSSYRNYERLDLQFENKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDKELIRWDEDYAKIEGRVIKKNGS
VPIQLVISKKGKKGKVNHIEQQKLSQYVGAVNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDLSLYQKILSQR
NHFLKQLQTRKQTDQTMLDVLTEQLTEFAAKVVMKRLQFVDQLEKWAQPIHSGISRGLEELTLKYHTSLHVSDSPDLSKM
INSYQETFSKLRDKEIERGVSLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIQEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHKTLNEAEIFRVENGTLSD

Nucleotide

• Length: 1113 bp

>NTDB_id=271530 BL14DL4_RS13010 WP_003178089.1 2449856..2450968(+) (recF) [Bacillus licheniformis strain 14ADL4]
TTGTATATCCAAAATCTTACATTATCGTCTTACCGTAATTATGAGCGCCTTGACCTTCAATTTGAGAACAAAGTGAACGT
GATTATCGGAGAGAACGCTCAAGGAAAAACAAATTTGATGGAAGCGATCTATGTGCTTGCGATGGCGAAATCCCATCGGA
CGTCAAATGATAAAGAACTCATACGATGGGATGAAGACTATGCTAAAATAGAAGGCAGGGTCATTAAAAAAAACGGTTCT
GTTCCCATTCAGCTTGTGATTTCCAAAAAAGGAAAAAAAGGTAAAGTGAATCATATTGAACAGCAGAAGCTGAGCCAGTA
TGTCGGGGCTGTCAACACGATTATGTTCGCGCCGGAGGATTTAAATCTCGTAAAAGGAAGTCCTCAGGTCAGAAGAAGGT
TTCTCGACATGGAAATCGGCCAAGTATCACCTGTCTATCTTCATGACCTTTCTCTTTACCAAAAAATCCTTTCACAACGG
AATCATTTCTTGAAGCAGCTTCAAACGAGAAAGCAAACCGATCAAACGATGCTTGACGTGCTGACGGAACAGCTTACGGA
ATTCGCGGCAAAGGTTGTGATGAAACGGCTTCAGTTTGTCGATCAGCTTGAAAAATGGGCTCAGCCCATTCATTCCGGAA
TTTCAAGAGGTCTGGAAGAGCTGACGTTAAAGTATCATACGTCTCTTCACGTATCAGATTCGCCCGATTTGTCGAAAATG
ATCAATAGTTATCAAGAAACGTTTTCTAAATTAAGAGATAAAGAAATAGAACGGGGGGTATCTCTTTCAGGTCCCCACAG
GGATGATGTTCTTTTCTATGTCAATGGCCGTGATGTGCAGACTTACGGATCGCAGGGCCAGCAGCGCACGACTGCATTGT
CGCTTAAATTGGCTGAAATCGACTTGATTCAGGAAGAGATAGGAGAATACCCGATTCTACTTTTGGATGATGTTTTATCA
GAGCTGGACGACTATCGGCAGTCTCACTTGCTCCACACCATTCAAGGCCGCGTTCAAACATTCGTAACAACGACAAGCGT
TGATGGAATTGATCATAAAACCTTAAACGAAGCGGAAATCTTTCGTGTTGAAAATGGCACGCTATCGGACTGA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-346)

3D structure

• AlphaFold DB: A0A415J9T0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	89.13	99.459	0.886