Detailed information NTG0270043

Bioinformatically predicted

Overview

• Name: comH
• Type: Machinery gene
• Locus tag: C2844_RS07920
• Genome accession: NZ_CP026515
• Coordinates: 1609187..1610626 (-)
• Length: 479 a.a.
• NCBI ID: WP_000749005.1
• Uniprot ID: A0AAC8N2R8
• Organism: Helicobacter pylori strain dRdM2addM2
• Function: import of DNA into the periplasm (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1604187..1615626

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C2844_RS07895 (C2844_07915)	recG	1605319..1607190 (-)	1872	WP_001158370.1	ATP-dependent DNA helicase RecG	-
C2844_RS07900 (C2844_07920)	-	1607272..1607619 (+)	348	WP_000837022.1	lipoprotein	-
C2844_RS07905 (C2844_07925)	-	1607623..1608258 (+)	636	WP_000765634.1	outer membrane protein	-
C2844_RS07910 (C2844_07930)	-	1608255..1609007 (-)	753	WP_000767556.1	exodeoxyribonuclease III	-
C2844_RS07920 (C2844_07940)	comH	1609187..1610626 (-)	1440	WP_000749005.1	hypothetical protein	Machinery gene
C2844_RS07925 (C2844_07945)	dnaA	1610855..1612228 (-)	1374	WP_000380647.1	chromosomal replication initiator protein DnaA	-
C2844_RS07930 (C2844_07950)	-	1612381..1612923 (+)	543	WP_000923009.1	hypothetical protein	-
C2844_RS07935 (C2844_07955)	-	1612966..1613205 (+)	240	WP_000461837.1	DUF2443 domain-containing protein	-
C2844_RS07940 (C2844_07960)	glmS	1613206..1614999 (+)	1794	WP_000334435.1	glutamine--fructose-6-phosphate transaminase (isomerizing)	-

Sequence

Protein

• Length: 479 a.a.
• Molecular weight: 54783.74 Da
• Isoelectric Point: 7.0430

>NTDB_id=270043 C2844_RS07920 WP_000749005.1 1609187..1610626(-) (comH) [Helicobacter pylori strain dRdM2addM2]
MKKSLCLSFFLTFSNPLQALVIELLEEIKTSPHKGTFKAKVLDSKKPRQVLGVYNISPHKKLTLTITHISTAIVYQPLDE
KLSLETTLNPNRPTIPRNTQIVFSSKELKESHPHQMPSLNAPMQKPQNKPHSSQQPSQNFSYPEPKLGSKNSKNSLLQPL
AIPSKISPTNETQTPTNDTKPPLKHSSEDQESNLFITPPTEKTLPNNTSNADISENNESNENKDNVEKQAIRDANIKEFA
CGKWVYDDENLQAYRPSILKRVDEDKQTATDITPCDYSTAENKSGKIITPYTKISVHKTEPLEEPQTFEAKNNFAILQAR
SSTEKCKRARARKDGTTRQCYLIEEPLKQAWESEYEITTQLVKAIYERPKQDDQVEPTFYETSELAYSSTRKSEITHNEL
NLNEKFMEFVEVYEGHYLNDIIKESSEYKEWVKNHVRFKEGVCMALEIEEQPRAKSTPLSIENSRVVCVKKGNYLFNEV

Nucleotide

• Length: 1440 bp

>NTDB_id=270043 C2844_RS07920 WP_000749005.1 1609187..1610626(-) (comH) [Helicobacter pylori strain dRdM2addM2]
ATGAAAAAATCCCTTTGTCTGTCTTTCTTTCTGACTTTCTCTAACCCTCTTCAAGCCCTTGTGATCGAGCTTTTAGAAGA
AATCAAAACTTCGCCGCATAAAGGCACTTTTAAGGCTAAAGTCCTTGATTCTAAAAAACCAAGACAAGTTTTAGGCGTTT
ATAATATCTCCCCACACAAAAAACTCACGCTCACTATCACCCACATATCCACTGCAATCGTCTATCAACCCCTTGATGAA
AAACTTTCTTTAGAAACAACCTTAAACCCTAACCGCCCTACTATCCCTAGAAACACCCAGATTGTTTTTTCTTCAAAAGA
ATTGAAAGAGTCGCACCCGCACCAAATGCCTTCTTTAAACGCGCCCATGCAAAAACCACAAAACAAACCCCATTCATCGC
AACAACCTTCTCAAAACTTTTCTTACCCAGAGCCCAAACTAGGCTCTAAAAACTCTAAAAACAGCCTTTTACAGCCTTTA
GCAATTCCTAGCAAAATAAGTCCCACTAACGAAACTCAAACGCCAACAAACGACACTAAACCCCCTTTAAAGCATTCTTC
AGAAGATCAAGAAAGCAACCTCTTTATAACGCCACCCACTGAAAAAACGCTCCCTAACAACACCTCTAACGCTGATATTA
GTGAAAACAATGAAAGCAATGAGAATAAAGATAATGTGGAAAAACAAGCCATTAGAGATGCTAATATTAAAGAATTTGCA
TGCGGGAAGTGGGTCTATGACGATGAAAATTTACAAGCCTACCGCCCAAGCATTTTAAAACGCGTTGATGAAGACAAACA
AACTGCAACAGATATTACCCCTTGCGATTACAGCACCGCTGAAAATAAAAGCGGTAAAATCATTACCCCCTATACTAAAA
TCTCCGTTCATAAAACAGAGCCTTTAGAAGAGCCACAAACTTTTGAAGCTAAAAATAATTTCGCCATTCTTCAAGCCAGA
AGCTCTACAGAAAAATGCAAAAGGGCTAGAGCAAGAAAAGACGGCACGACTAGGCAATGCTATCTAATAGAAGAGCCTTT
AAAACAAGCATGGGAGAGTGAGTATGAAATCACCACGCAATTAGTGAAAGCCATTTATGAGCGCCCCAAACAAGACGATC
AAGTAGAGCCGACTTTTTATGAAACCAGCGAATTGGCTTATTCTTCCACACGAAAAAGCGAAATAACGCACAATGAATTG
AATTTGAATGAAAAATTCATGGAATTTGTGGAAGTGTATGAGGGGCATTATTTAAACGATATAATTAAAGAGAGCAGTGA
ATATAAAGAATGGGTTAAAAACCATGTGCGCTTTAAAGAAGGGGTGTGCATGGCTTTAGAAATAGAAGAACAGCCACGAG
CTAAAAGCACGCCTTTGAGTATTGAAAACTCTCGTGTGGTATGTGTCAAAAAGGGGAATTATTTATTCAACGAAGTTTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comH	Helicobacter pylori 26695	100	100	1