Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | RK85_RS11920 | Genome accession | NZ_CP026070 |
| Coordinates | 2255964..2256263 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain FDAARGOS_27 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2250964..2261263
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RK85_RS11880 (RK85_011880) | - | 2251025..2251228 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| RK85_RS11885 (RK85_011885) | - | 2251225..2252211 (+) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| RK85_RS11890 (RK85_011890) | - | 2252211..2252540 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| RK85_RS11895 (RK85_011895) | - | 2252537..2253160 (+) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| RK85_RS11900 (RK85_011900) | comGA | 2253212..2254186 (+) | 975 | WP_000697228.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| RK85_RS11905 (RK85_011905) | comGB | 2254158..2255228 (+) | 1071 | Protein_2197 | competence type IV pilus assembly protein ComGB | - |
| RK85_RS11910 (RK85_011910) | comGC | 2255242..2255553 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| RK85_RS11915 (RK85_011915) | comGD | 2255531..2255977 (+) | 447 | WP_001790850.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| RK85_RS11920 (RK85_011920) | comGE | 2255964..2256263 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| RK85_RS11925 (RK85_011925) | comGF | 2256181..2256678 (+) | 498 | WP_001789864.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| RK85_RS11930 (RK85_011930) | - | 2256775..2256921 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| RK85_RS11935 (RK85_011935) | - | 2256911..2257435 (+) | 525 | WP_001015117.1 | shikimate kinase | - |
| RK85_RS11940 (RK85_011940) | gcvT | 2257594..2258685 (+) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| RK85_RS11945 (RK85_011945) | gcvPA | 2258705..2260051 (+) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=266533 RK85_RS11920 WP_000844413.1 2255964..2256263(+) (comGE) [Staphylococcus aureus strain FDAARGOS_27]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=266533 RK85_RS11920 WP_000844413.1 2255964..2256263(+) (comGE) [Staphylococcus aureus strain FDAARGOS_27]
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGTTCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |