Detailed information NTG0263807

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: C1S73_RS13990
• Genome accession: NZ_CP025792
• Coordinates: 2917175..2920561 (-)
• Length: 1128 a.a.
• NCBI ID: WP_038865845.1
• Uniprot ID: A0A2A2NC29
• Organism: Vibrio jasicida 090810c
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2912175..2925561

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C1S73_RS13975	-	2912500..2913525 (-)	1026	WP_038865839.1	ABC transporter permease	-
C1S73_RS13980	-	2913528..2914514 (-)	987	WP_038865841.1	ABC transporter permease	-
C1S73_RS13985	-	2914685..2916367 (-)	1683	WP_038865843.1	ABC transporter substrate-binding protein	-
C1S73_RS13990	chiS	2917175..2920561 (-)	3387	WP_038865845.1	response regulator	Regulator
C1S73_RS14000	rsmC	2920791..2921816 (-)	1026	WP_038865846.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
C1S73_RS14005	-	2921893..2922978 (-)	1086	WP_038865847.1	AI-2E family transporter	-
C1S73_RS14015	hemL	2923338..2924633 (-)	1296	WP_038865849.1	glutamate-1-semialdehyde 2,1-aminomutase	-
C1S73_RS14020	erpA	2924880..2925221 (+)	342	WP_005439421.1	iron-sulfur cluster insertion protein ErpA	-

Sequence

Protein

• Length: 1128 a.a.
• Molecular weight: 127364.13 Da
• Isoelectric Point: 5.5014

>NTDB_id=263807 C1S73_RS13990 WP_038865845.1 2917175..2920561(-) (chiS) [Vibrio jasicida 090810c]
MFKFYKKQKFKRLQSTLMTAFLVLSITPLTITAIFFLQSHSKDLQEQSTSHLLSVRDTKQQQIIDYFAAQETEVMGFVRS
ELAYASGGRFYGLVNAFSRLGHDIDEARENAQQRYIQGSGDQIKTSILPESSNYVGSERYRLLHKRYHWAYLELLKRSDF
NDILLVDIDGNVTYSINKDDNYGTNLLTGSYKDSALGRTFKRLSEDVNARRKVNEDYTPVVFSDFEIENGKQVAWLGAPI
VQQGYLHSYAMFRLPNNGITKLIAEINRDSSIETLLVGSDHKPRTINTKQDNIQNSLEIIDKALAGETEVGTYSNRLGEE
MIAAFAPIETRGLTWALVVQLPEKEAFARVHQLEKLFVIAMLIAIVLVVIASHYLSNFITSPLLKLTWAAEKVSAGDLDE
TTFNTQRKDEIGRLAISFERMQRSIREKIQTIKQQNEELESNIKLIQKQNEELQLADKLKDEFLATTSHELRTPLHGMVG
IAETLVSGANGAIPSSQKYQLDIIIKSGQRLANLVDDLLDYHKMRYGSMDIQKSAVSLASATRLVLELSGHLLGNKTIRI
INQVPADLKAVSADPQRIEQVLYNLIGNAIKYTSEGKIVISANVVDDQVRVQVVDTGQGIPAEHLEHIFEPLIQAGQDAS
RYRQGAGLGLSISRQLIELMGGSLYVSSQPMVGTTFSFTLPLATEEEIKATQTLAARGHFQIPEANLENTDDLSLPENPD
GPLLYVADDEPVNLRVLESFLRLEGYRVRTISDGPDTLALIEQEKPELLLLDIMMPGMSGYQVCSELRNTYDHAELPIIM
LTALSQTEDRVRGFEAGANDYLSKPFNKQELAARIQAHLTASKAEMRHMENKLLESELRQRAEVEASLLETQGRLLEQLE
SAPEAIICLREDQRIRFANEAACKLFKRSLEQLKRSSADELIAPKFLTVKQPHYCGKIDIYIEDIRQNIEADILKLPEGS
GLDVMYIFNVGGGANAARIHNLETAVEVLSCYAFDGDKDQLQKLKELGGEFTRLADKALGNKKDKQELMREVLVDAMTHA
LEYWESVTGETKFAFAEQSGFWRVYLDRSTLQTRTLDKYMRIETLPKTPRWRTVLNSIEFILEHCKEQSPERAYIEAQRD
KLQRLLTS

Nucleotide

• Length: 3387 bp

>NTDB_id=263807 C1S73_RS13990 WP_038865845.1 2917175..2920561(-) (chiS) [Vibrio jasicida 090810c]
ATGTTTAAATTCTACAAAAAGCAGAAATTTAAGCGCCTGCAAAGCACGCTAATGACCGCGTTTTTGGTTCTTAGTATCAC
GCCTTTAACGATCACTGCGATTTTCTTCCTGCAGTCACACAGTAAAGATCTTCAAGAACAAAGTACCTCACACCTACTTT
CTGTGCGTGACACGAAGCAACAACAGATCATCGACTACTTTGCGGCTCAAGAAACTGAGGTCATGGGCTTTGTTCGCTCA
GAATTGGCGTATGCCAGTGGTGGTCGATTCTATGGTTTAGTCAATGCATTCAGTCGCCTAGGGCATGATATTGACGAAGC
GAGAGAGAACGCACAGCAACGTTATATCCAAGGCAGTGGCGACCAGATAAAAACTTCAATTTTGCCAGAGTCCTCTAACT
ATGTTGGTAGTGAGCGTTATCGCCTATTACATAAACGCTACCACTGGGCGTATCTAGAACTGTTAAAGCGCTCTGACTTC
AACGACATCTTGTTGGTCGATATTGACGGCAACGTGACTTATTCAATCAATAAAGATGACAATTACGGCACAAACTTACT
GACTGGCAGCTATAAAGACAGCGCCTTGGGCCGAACATTCAAACGTCTGTCGGAGGACGTTAATGCGCGTCGTAAAGTCA
ATGAAGATTATACACCTGTTGTGTTTTCTGACTTTGAGATCGAAAACGGTAAGCAAGTCGCCTGGCTAGGTGCGCCGATT
GTTCAGCAAGGTTACCTGCACAGCTATGCCATGTTCCGACTACCAAACAATGGCATTACAAAGCTAATTGCAGAAATTAA
CCGTGATTCTTCTATTGAGACTTTGTTGGTTGGCAGTGATCACAAACCTCGTACAATTAACACCAAGCAAGACAACATCC
AAAACAGCCTAGAAATTATCGACAAAGCACTCGCGGGCGAAACCGAAGTAGGCACTTACAGCAACCGCTTAGGTGAAGAG
ATGATCGCGGCGTTTGCACCCATTGAAACTCGTGGTTTAACTTGGGCGCTAGTCGTACAGCTTCCTGAAAAAGAAGCGTT
TGCCCGTGTCCATCAGCTTGAGAAACTGTTTGTGATTGCGATGTTGATTGCAATTGTATTAGTCGTTATCGCTTCACATT
ACTTATCTAATTTCATCACTTCGCCGCTACTCAAGCTTACTTGGGCAGCAGAGAAAGTGTCTGCTGGTGACTTAGATGAG
ACAACCTTTAATACTCAGCGAAAAGATGAGATCGGGCGTCTTGCGATCAGCTTTGAACGTATGCAGCGCTCAATTCGAGA
AAAGATTCAAACGATTAAACAACAAAACGAAGAGCTTGAGAGCAACATTAAGTTGATTCAAAAGCAAAACGAGGAGTTGC
AATTAGCAGACAAACTCAAAGATGAATTCCTAGCAACTACGTCTCACGAATTGCGGACACCGCTACACGGCATGGTGGGG
ATTGCAGAGACATTGGTATCTGGCGCAAACGGTGCGATTCCTTCGAGCCAAAAATACCAGCTAGACATCATTATTAAGAG
TGGTCAGCGCTTGGCAAATCTCGTTGATGATTTATTGGATTATCATAAGATGCGCTATGGCAGCATGGATATCCAAAAAT
CAGCGGTAAGCTTAGCAAGTGCAACACGTTTGGTACTGGAACTCTCTGGCCACCTGTTAGGTAACAAAACAATCCGCATC
ATTAACCAAGTCCCTGCGGATTTAAAAGCGGTCTCTGCCGATCCACAACGTATAGAGCAAGTGCTTTACAATTTGATTGG
TAACGCAATTAAGTACACCTCAGAAGGTAAAATTGTCATCTCCGCAAATGTGGTGGACGATCAGGTGCGCGTCCAAGTCG
TTGATACTGGCCAAGGTATCCCAGCGGAACATTTGGAGCACATCTTTGAACCGCTCATTCAGGCGGGCCAAGATGCAAGT
CGTTACCGTCAGGGTGCAGGACTCGGCCTATCCATTAGCCGTCAGCTTATCGAGTTGATGGGCGGCTCACTGTATGTCAG
CAGTCAACCAATGGTAGGAACAACCTTTAGCTTCACTTTACCTCTTGCAACAGAAGAGGAAATAAAAGCAACACAAACTC
TGGCGGCTCGTGGTCACTTCCAAATCCCTGAAGCAAATTTGGAAAACACCGACGACTTATCTCTGCCAGAAAACCCGGAT
GGTCCACTACTCTACGTCGCAGATGATGAACCAGTAAACTTACGCGTTTTAGAGAGCTTCTTACGATTGGAAGGCTATCG
AGTGCGTACGATTTCAGATGGCCCTGATACGCTAGCGTTAATTGAACAAGAGAAACCAGAGCTGTTGCTATTGGATATCA
TGATGCCAGGCATGAGTGGCTACCAGGTATGTAGCGAGTTACGTAACACTTACGACCACGCAGAACTGCCGATCATCATG
TTAACGGCATTAAGCCAGACAGAAGATCGTGTAAGAGGCTTCGAGGCTGGTGCAAATGATTACTTGTCCAAACCATTTAA
TAAACAAGAACTAGCCGCTCGAATCCAAGCGCATTTGACAGCAAGCAAAGCCGAAATGCGTCACATGGAAAACAAGTTGC
TTGAATCTGAGCTGCGTCAACGCGCAGAAGTCGAAGCCAGTTTACTTGAAACACAAGGACGTTTGTTAGAGCAACTTGAA
TCTGCTCCAGAGGCCATCATCTGTTTGCGAGAAGACCAACGAATTCGCTTTGCCAACGAGGCGGCTTGTAAACTCTTCAA
ACGCAGCCTAGAACAGTTAAAACGCTCATCAGCTGATGAACTCATTGCGCCAAAATTCTTAACCGTCAAGCAACCACACT
ACTGTGGCAAGATTGATATCTACATCGAAGATATTCGTCAAAACATTGAAGCAGACATTCTCAAACTGCCAGAAGGCTCT
GGTTTAGACGTTATGTACATCTTTAACGTTGGTGGTGGAGCAAACGCAGCACGTATTCATAATCTGGAAACGGCAGTAGA
AGTTCTTTCATGCTATGCGTTCGATGGAGACAAAGATCAACTACAAAAACTGAAAGAGCTGGGCGGAGAGTTTACTCGTC
TTGCCGACAAAGCATTAGGCAATAAGAAAGATAAACAAGAGTTGATGCGTGAAGTGCTGGTTGATGCGATGACACATGCT
TTAGAATACTGGGAGTCCGTTACAGGAGAAACCAAGTTTGCTTTCGCTGAGCAAAGCGGCTTTTGGCGTGTTTACCTAGA
CCGCAGTACATTACAGACTCGAACACTTGATAAATACATGCGCATCGAAACTTTGCCAAAAACACCTCGCTGGAGAACCG
TTTTAAACTCGATAGAGTTTATTCTTGAGCACTGTAAAGAACAAAGCCCAGAACGTGCTTACATCGAAGCACAGCGGGAC
AAACTGCAAAGGCTCCTCACGAGCTAA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (460-525)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (574-683)

• Response regulator receiver domain (Response_reg) (726-836)

• HAMP domain (HAMP) (375-427)

3D structure

• AlphaFold DB: A0A2A2NC29

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	76.528	100	0.766