Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   CHN55_RS09705 Genome accession   NZ_CP030136
Coordinates   1831565..1832284 (-) Length   239 a.a.
NCBI ID   WP_001217723.1    Uniprot ID   -
Organism   Staphylococcus aureus strain S57     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1826565..1837284
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CHN55_RS09685 (CHN55_09685) - 1826948..1827313 (+) 366 WP_000214070.1 truncated hemoglobin YjbI -
  CHN55_RS09690 (CHN55_09690) yjbH 1827336..1828142 (+) 807 WP_000896697.1 protease adaptor protein YjbH -
  CHN55_RS09695 (CHN55_09695) pepF 1828602..1830410 (-) 1809 WP_000082725.1 oligoendopeptidase F Regulator
  CHN55_RS09700 (CHN55_09700) coiA 1830458..1831444 (-) 987 WP_000959292.1 competence protein CoiA family protein Machinery gene
  CHN55_RS09705 (CHN55_09705) mecA 1831565..1832284 (-) 720 WP_001217723.1 adaptor protein MecA Regulator
  CHN55_RS09710 (CHN55_09710) spxA 1832655..1833050 (-) 396 WP_000258003.1 transcriptional regulator SpxA -
  CHN55_RS09715 (CHN55_09715) trpS 1833345..1834334 (+) 990 WP_031589556.1 tryptophan--tRNA ligase -
  CHN55_RS09720 (CHN55_09720) opp4C 1834376..1835257 (-) 882 WP_001180280.1 oligopeptide ABC transporter permease -
  CHN55_RS09725 (CHN55_09725) opp4B 1835269..1836231 (-) 963 WP_000239820.1 oligopeptide ABC transporter permease -
  CHN55_RS09730 (CHN55_09730) - 1836224..1837204 (-) 981 WP_000427769.1 dipeptide ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 239 a.a.        Molecular weight: 28285.17 Da        Isoelectric Point: 4.1548

>NTDB_id=259060 CHN55_RS09705 WP_001217723.1 1831565..1832284(-) (mecA) [Staphylococcus aureus strain S57]
MRIERVDDTTVKLFITYSDIEARGFSREDLWTNRKRGEEFFWSMMDEINEEEDFVVEGPLWIQVHAFEKGVEVTISKSKN
EDMMNMSDDDATDQFDEQVQELLAQTLEGEDQLEELFDQRTKEKEAQGSKRQKSSARKNTRTIIVKFNDLEDVINYAYHS
NPITTEFEDLLYMVDGTYYYAVHFDSHVDQEVINDSYSQLLEFAYPTDRTEVYLNDYAKIIMSHNVTAQVRRYFPETTE

Nucleotide


Download         Length: 720 bp        

>NTDB_id=259060 CHN55_RS09705 WP_001217723.1 1831565..1832284(-) (mecA) [Staphylococcus aureus strain S57]
ATGAGAATAGAACGAGTAGATGATACAACTGTAAAATTGTTTATAACATATAGCGATATCGAGGCCCGTGGATTTAGTCG
TGAAGATTTATGGACAAATCGCAAACGTGGCGAAGAATTCTTTTGGTCAATGATGGATGAAATTAACGAAGAAGAAGATT
TTGTTGTAGAAGGTCCATTATGGATTCAAGTACATGCCTTTGAAAAAGGTGTCGAAGTCACAATTTCTAAATCTAAAAAT
GAAGATATGATGAATATGTCTGATGATGATGCAACTGATCAATTTGATGAACAAGTTCAAGAATTGTTAGCTCAAACATT
AGAAGGTGAAGATCAATTAGAAGAATTATTCGATCAACGAACAAAAGAAAAAGAAGCTCAAGGTTCTAAACGTCAAAAGT
CTTCAGCACGTAAAAATACAAGAACAATTATTGTGAAATTTAACGATTTAGAAGATGTTATTAATTATGCATATCATAGC
AATCCAATAACTACAGAGTTTGAAGATTTGTTATATATGGTTGATGGTACTTATTATTATGCTGTACATTTTGATAGTCA
TGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAACAGACAGAACAGAAGTTTATT
TAAATGACTATGCTAAAATAATTATGAGTCATAACGTAACAGCTCAAGTTCGACGTTATTTTCCAGAGACAACTGAATAA

Domains

Predicted by InterProScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-229)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

37.975

99.163

0.377

Multiple sequence alignment