Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   A7J09_RS02285 Genome accession   NZ_CP030015
Coordinates   458410..458859 (+) Length   149 a.a.
NCBI ID   WP_029174721.1    Uniprot ID   -
Organism   Streptococcus suis strain ISU2812     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 453410..463859
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A7J09_RS02260 (A7J09_02290) - 453944..455071 (+) 1128 WP_024394877.1 N-acetyldiaminopimelate deacetylase -
  A7J09_RS02265 (A7J09_02295) - 455112..455654 (+) 543 WP_029178571.1 5-formyltetrahydrofolate cyclo-ligase -
  A7J09_RS02270 (A7J09_02300) - 455638..456315 (+) 678 WP_029178570.1 rhomboid family intramembrane serine protease -
  A7J09_RS02275 (A7J09_02305) galU 456331..457233 (-) 903 WP_023371721.1 UTP--glucose-1-phosphate uridylyltransferase GalU -
  A7J09_RS02280 (A7J09_02310) - 457252..458268 (-) 1017 WP_029173340.1 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase -
  A7J09_RS02285 (A7J09_02315) rcrR 458410..458859 (+) 450 WP_029174721.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  A7J09_RS02290 (A7J09_02320) - 458852..460558 (+) 1707 WP_029178569.1 ABC transporter ATP-binding protein -
  A7J09_RS02295 (A7J09_02325) - 460559..462343 (+) 1785 WP_024394879.1 ABC transporter ATP-binding protein -
  A7J09_RS02300 (A7J09_02330) - 462445..462888 (+) 444 WP_029178568.1 dUTP diphosphatase -
  A7J09_RS02305 (A7J09_02335) - 462895..463428 (+) 534 WP_029178567.1 histidine phosphatase family protein -

Sequence

Protein


Download         Length: 149 a.a.        Molecular weight: 17383.91 Da        Isoelectric Point: 7.5565

>NTDB_id=257947 A7J09_RS02285 WP_029174721.1 458410..458859(+) (rcrR) [Streptococcus suis strain ISU2812]
MGHTIADFRNLLNQIEQISETIAKEYDVEHLAGPQGWALRFIAERSETETFVKDIEAELKISKSVASNLVKRMEKNGFIQ
VLPSQVDKRYKRLVLTEKGQGKICHLKAFHEEMHHSLFWGIQKEDFDLVKQVANQLKENIQHYKEKNHV

Nucleotide


Download         Length: 450 bp        

>NTDB_id=257947 A7J09_RS02285 WP_029174721.1 458410..458859(+) (rcrR) [Streptococcus suis strain ISU2812]
GTGGGACATACCATTGCAGATTTTCGGAACTTGCTCAATCAGATTGAACAAATCAGTGAAACCATTGCAAAAGAATACGA
TGTGGAGCACTTGGCTGGTCCACAGGGCTGGGCATTGCGTTTCATTGCGGAACGGTCGGAAACCGAAACCTTTGTAAAAG
ATATAGAAGCGGAATTAAAGATTTCCAAATCCGTTGCCAGCAATCTGGTCAAGCGAATGGAGAAAAATGGCTTTATCCAA
GTCCTGCCTTCTCAGGTTGACAAACGCTACAAGCGGTTGGTTTTGACAGAGAAAGGACAAGGAAAAATCTGTCACCTGAA
AGCCTTCCATGAAGAAATGCACCATTCACTTTTTTGGGGCATTCAAAAAGAAGACTTTGATTTGGTCAAACAGGTGGCTA
ATCAATTAAAAGAAAATATTCAACACTATAAGGAGAAGAATCATGTTTAA

Domains

Predicted by InterProScan.

MarR family (MarR_2)

(33-89)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

43.972

94.631

0.416