Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   CR152_RS12575 Genome accession   NZ_CP024608
Coordinates   2755919..2756320 (+) Length   133 a.a.
NCBI ID   WP_099875210.1    Uniprot ID   A0A2D2DJV0
Organism   Massilia violaceinigra strain B2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2750919..2761320
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CR152_RS12540 (CR152_12480) - 2751016..2751459 (+) 444 WP_099875204.1 hypothetical protein -
  CR152_RS12545 (CR152_12485) corA 2751541..2752506 (+) 966 WP_099875205.1 magnesium/cobalt transporter CorA -
  CR152_RS12550 (CR152_12490) - 2752749..2753027 (+) 279 WP_099875206.1 colicin E5-related ribonuclease -
  CR152_RS12555 (CR152_12495) - 2753041..2753400 (+) 360 WP_099875207.1 colicin immunity protein -
  CR152_RS12560 (CR152_12500) hemL 2753425..2754714 (-) 1290 WP_099875208.1 glutamate-1-semialdehyde 2,1-aminomutase -
  CR152_RS12565 (CR152_12505) - 2754711..2755553 (-) 843 WP_099875209.1 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase -
  CR152_RS12570 (CR152_12510) - 2755610..2755813 (+) 204 WP_370663816.1 rubredoxin -
  CR152_RS12575 (CR152_12515) pilG 2755919..2756320 (+) 402 WP_099875210.1 PleD family two-component system response regulator Regulator
  CR152_RS12580 (CR152_12520) - 2756338..2756709 (+) 372 WP_054268474.1 response regulator transcription factor -
  CR152_RS12585 (CR152_12525) - 2756713..2757246 (+) 534 WP_229413365.1 chemotaxis protein CheW -
  CR152_RS12590 (CR152_12530) - 2757291..2759603 (+) 2313 WP_229413366.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14670.94 Da        Isoelectric Point: 7.3218

>NTDB_id=254206 CR152_RS12575 WP_099875210.1 2755919..2756320(+) (pilG) [Massilia violaceinigra strain B2]
MTTLPQPNVLKIMVIDDSSTIRRSAEIFLTQAGYQVVLAEDGFDALAKINDHHPSLIFCDILMPRLDGYQTCALIKRSAR
FHATPVLMLSSKDGLFDRARGLMVGSSAYLTKPFSKDSLLSAVREHTADAESK

Nucleotide


Download         Length: 402 bp        

>NTDB_id=254206 CR152_RS12575 WP_099875210.1 2755919..2756320(+) (pilG) [Massilia violaceinigra strain B2]
ATGACGACATTGCCGCAACCGAACGTACTGAAAATCATGGTGATCGACGACAGCAGTACGATTCGTCGTTCGGCCGAGAT
TTTTCTCACCCAGGCTGGGTATCAGGTGGTGCTGGCCGAAGATGGTTTCGATGCCCTGGCCAAGATTAACGACCATCATC
CGTCGCTGATTTTCTGCGACATCCTGATGCCACGCCTCGATGGCTACCAGACCTGCGCGCTGATCAAGCGAAGCGCGCGT
TTTCATGCCACCCCGGTGCTGATGCTCTCATCGAAGGATGGCCTGTTCGACCGCGCCCGCGGCCTGATGGTCGGTTCTTC
CGCCTACCTTACCAAACCTTTCAGCAAAGACAGTCTGCTCAGCGCGGTGCGCGAACATACTGCCGACGCCGAATCAAAAT
AA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(12-123)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2D2DJV0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

63.025

89.474

0.564

Multiple sequence alignment