Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   DBP13_RS21210 Genome accession   NZ_CP028834
Coordinates   4603508..4604632 (-) Length   374 a.a.
NCBI ID   WP_128802616.1    Uniprot ID   -
Organism   Streptomyces sp. M2     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4598508..4609632
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DBP13_RS21185 cseB 4599279..4599983 (-) 705 WP_108011025.1 two-component system response regulator CseB -
  DBP13_RS21190 - 4600071..4600724 (-) 654 WP_108011027.1 hypothetical protein -
  DBP13_RS21195 - 4600712..4601251 (-) 540 WP_108011029.1 SigE family RNA polymerase sigma factor -
  DBP13_RS21200 - 4601491..4602426 (-) 936 WP_128802614.1 A/G-specific adenine glycosylase -
  DBP13_RS21205 - 4602594..4603442 (+) 849 WP_128802615.1 hypothetical protein -
  DBP13_RS21210 disA 4603508..4604632 (-) 1125 WP_128802616.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  DBP13_RS21215 radA 4604714..4606123 (-) 1410 WP_128802617.1 DNA repair protein RadA Machinery gene
  DBP13_RS21220 - 4606340..4608034 (+) 1695 WP_128802618.1 hypothetical protein -
  DBP13_RS21225 - 4608584..4609432 (-) 849 WP_128802619.1 hypothetical protein -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40167.91 Da        Isoelectric Point: 4.9201

>NTDB_id=248494 DBP13_RS21210 WP_128802616.1 4603508..4604632(-) (disA) [Streptomyces sp. M2]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERVLRGNTGGLVVLGFDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGGIVLNSDLSKILRAGVQFLPDATIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALYELDALTHAELLELPTVARALGYTGAPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=248494 DBP13_RS21210 WP_128802616.1 4603508..4604632(-) (disA) [Streptomyces sp. M2]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAATCCGGTGGGAGTTCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCACCCGGCACGGCACTGCGCGACGGGCTCGAGCGGGTACTCCGCGGCAACACCGGCGGTCTCGTCGTGC
TCGGCTTCGACAAGACCGTCGAGTCCATGTGCACGGGCGGCTTCGTGCTGGACGTCGAGTTCACGGCCACCCGCCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGCTGAACTCCGACCTGTCGAAGATCCTGCGGGCGGGCGTGCAGTTCCTGCC
CGACGCGACGATCCCGACCGAGGAGACGGGCACCCGCCACCGCACGGCGGACCGGGTCAGCAAGCAGGTCGGCTTCCCGG
TCGTCTCGGTGTCGCAGTCCATGCGCCTGATCGCCCTCTACGTCGACGGCCAGCGCCGCGTCCTGGAGGACTCCGCGGCG
ATCCTCTCCCGCGCCAACCAGGCCCTCGCGACCCTGGAGCGCTACAAGCTCCGCCTGGACGAGGTCGCGGGCACGCTGTC
GGCACTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCGGCGGTGGCGCAGCGCCTTGAGATGGTGCGCCGTATCG
CCACCGAAATCGCTGAATACGTGGTCGAACTGGGCACGGACGGCCGCCTGCTCGCCCTGCAGCTCGACGAGTTGATCGCG
GGCGTGGAACCCGAGCGCGAGCTGGTGGTCCGGGACTACGTCCCCGAGCCCACCGCCAAGCGCTCCCGCACGGTCGACGA
GGCGCTCTACGAACTCGACGCGCTCACCCACGCCGAGCTCCTGGAACTGCCCACGGTGGCACGGGCGTTGGGCTACACGG
GAGCTCCGGAGACGCTGGACTCCGCGGTCTCGCCGCGCGGCTTCAGGCTGCTGGCCAAGGTGCCGCGGCTGCCGGGCGCC
ATCATCGACCGTCTCGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTCGCCGCCAGCGTCGACGATCTGCAGACCGTCGA
CGGCGTGGGCGAGGCCCGTGCGCGCAGCGTGCGCGAGGGCCTTTCGAGGCTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTGA

Domains

Predicted by InterProScan.

Helix-hairpin-helix motif (HHH_2)

(324-359)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-296)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436