Detailed information NTG0244222

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: Aba10042_RS10035
• Genome accession: NZ_CP023026
• Coordinates: 2070994..2071695 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 10042
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2065994..2076695

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Aba10042_RS10005 (Aba10042_09955)	-	2066300..2066743 (-)	444	WP_001246675.1	SRPBCC family protein	-
Aba10042_RS10010 (Aba10042_09960)	tadA	2066813..2067316 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
Aba10042_RS10015 (Aba10042_09965)	-	2067323..2068447 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
Aba10042_RS10020 (Aba10042_09970)	ung	2068444..2069157 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
Aba10042_RS10025 (Aba10042_09975)	-	2069208..2069804 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
Aba10042_RS10030 (Aba10042_09980)	gspK	2070035..2070994 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
Aba10042_RS10035 (Aba10042_09985)	xcpW	2070994..2071695 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
Aba10042_RS10040 (Aba10042_09990)	xcpV	2071695..2072075 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
Aba10042_RS10045 (Aba10042_09995)	-	2072065..2072619 (-)	555	WP_000841373.1	type II secretion system protein	-
Aba10042_RS10050 (Aba10042_10000)	-	2072629..2073237 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
Aba10042_RS10055 (Aba10042_10005)	-	2073275..2074048 (-)	774	WP_000497298.1	TatD family hydrolase	-
Aba10042_RS10060 (Aba10042_10010)	-	2074066..2074407 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
Aba10042_RS10065 (Aba10042_10015)	-	2074419..2075399 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
Aba10042_RS10070 (Aba10042_10020)	kdsB	2075411..2076172 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=244222 Aba10042_RS10035 WP_000594589.1 2070994..2071695(-) (xcpW) [Acinetobacter baumannii strain 10042]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=244222 Aba10042_RS10035 WP_000594589.1 2070994..2071695(-) (xcpW) [Acinetobacter baumannii strain 10042]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996