Detailed information NTG0240910

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: A17_RS05925
• Genome accession: NZ_CP028372
• Coordinates: 1121930..1122889 (+)
• Length: 319 a.a.
• NCBI ID: WP_002875425.1
• Uniprot ID: Q0P9A8
• Organism: Campylobacter jejuni subsp. jejuni strain huA17
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1116930..1127889

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A17_RS05905 (A17_01195)	neuC	1117497..1118612 (+)	1116	WP_002858400.1	UDP-N-acetylglucosamine 2-epimerase	-
A17_RS10045	-	1118609..1119523 (+)	915	Protein_1139	beta-1,4-N-acetylgalactosaminyltransferase	-
A17_RS10050	-	1119557..1120219 (+)	663	WP_032596875.1	acylneuraminate cytidylyltransferase	-
A17_RS05915 (A17_01197)	-	1120214..1121063 (-)	850	Protein_1141	glycosyltransferase	-
A17_RS05920 (A17_01199)	waaV	1121047..1121871 (-)	825	WP_002858096.1	glycosyltransferase family 2 protein	-
A17_RS05925 (A17_01200)	waaF	1121930..1122889 (+)	960	WP_002875425.1	lipopolysaccharide heptosyltransferase II	Regulator
A17_RS05930 (A17_01201)	gmhA	1122870..1123430 (-)	561	WP_002875424.1	D-sedoheptulose 7-phosphate isomerase	-
A17_RS05935 (A17_01202)	rfaE1	1123427..1124812 (-)	1386	WP_002858114.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
A17_RS05940 (A17_01203)	rfaD	1124805..1125758 (-)	954	WP_052794327.1	ADP-glyceromanno-heptose 6-epimerase	-
A17_RS05945 (A17_01204)	gmhB	1125755..1126319 (-)	565	Protein_1147	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
A17_RS05950 (A17_01205)	-	1126400..1126702 (+)	303	WP_002852762.1	cytochrome c	-
A17_RS05955 (A17_01206)	ccoS	1126725..1126931 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36734.30 Da
• Isoelectric Point: 10.2412

>NTDB_id=240910 A17_RS05925 WP_002875425.1 1121930..1122889(+) (waaF) [Campylobacter jejuni subsp. jejuni strain huA17]
MKIFIHLPTWLGDTVMASPALYTIKEHFKDAQFILYGSFVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDLSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLILRNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHDILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPEKVIEQAKNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=240910 A17_RS05925 WP_002875425.1 1121930..1122889(+) (waaF) [Campylobacter jejuni subsp. jejuni strain huA17]
ATGAAAATTTTTATACATCTTCCCACCTGGTTAGGCGATACGGTAATGGCTTCACCTGCTTTATACACTATAAAAGAACA
TTTTAAAGATGCTCAGTTTATCCTTTATGGTTCTTTTGTTTCTACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATCTTAGCTTTGCT
TTTAGATCTGCGTTCTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAATTCACTTAGTATAAAAGCTCATTTTAAGGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAGAAATGGTAAAAAAATTCTAGGACTCAACCCTGGTGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGATATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGACCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAATGCAAAATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTGAAAAAGTGATAGAACAGGCTAAAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (94-294)

3D structure

• AlphaFold DB: Q0P9A8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1