Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   C6376_RS06880 Genome accession   NZ_CP028369
Coordinates   1533367..1534491 (+) Length   374 a.a.
NCBI ID   WP_057577693.1    Uniprot ID   A0ABU0Q5M6
Organism   Streptomyces sp. P3     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 1528367..1539491
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C6376_RS06865 (C6376_06865) - 1528878..1529684 (+) 807 WP_107442602.1 hypothetical protein -
  C6376_RS06870 (C6376_06870) - 1529818..1531656 (-) 1839 WP_254075853.1 hypothetical protein -
  C6376_RS06875 (C6376_06875) radA/sms 1531876..1533285 (+) 1410 WP_107442604.1 DNA repair protein RadA Machinery gene
  C6376_RS06880 (C6376_06880) disA 1533367..1534491 (+) 1125 WP_057577693.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  C6376_RS06885 (C6376_06885) - 1534598..1535443 (-) 846 WP_173985593.1 hypothetical protein -
  C6376_RS06890 (C6376_06890) - 1535700..1536638 (+) 939 WP_107442605.1 A/G-specific adenine glycosylase -
  C6376_RS06895 (C6376_06895) - 1537053..1537595 (+) 543 WP_057577696.1 SigE family RNA polymerase sigma factor -
  C6376_RS06900 (C6376_06900) - 1537670..1538314 (+) 645 WP_107448811.1 hypothetical protein -
  C6376_RS06905 (C6376_06905) cseB 1538514..1539215 (+) 702 WP_107442606.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40065.83 Da        Isoelectric Point: 5.0961

>NTDB_id=240834 C6376_RS06880 WP_057577693.1 1533367..1534491(+) (disA) [Streptomyces sp. P3]
MAANDRAAAPGKSGGSSGSDGLMRAALSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFVLNVEFAATRLR
ELCKLDGGIVVSSDLSKILRAGVQLVPDPMIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALHELDALTHAELLELSTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFSSLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=240834 C6376_RS06880 WP_057577693.1 1533367..1534491(+) (disA) [Streptomyces sp. P3]
GTGGCAGCCAACGACCGGGCGGCAGCTCCCGGAAAGTCCGGTGGGAGTTCCGGTTCCGACGGCCTGATGCGCGCCGCGCT
GAGCGCGGTGGCCCCCGGCACGGCCCTGCGCGACGGCCTGGAGAGGATCCTCCGCGGCAACACCGGCGGGCTGATCGTGC
TGGGCTCCGACAAGACGGTCGAAGCGATGTGCACGGGCGGGTTCGTCCTGAACGTGGAATTCGCGGCCACGCGTCTGCGT
GAGCTGTGCAAGCTCGACGGCGGCATCGTGGTCTCCTCCGACCTGTCGAAGATCCTCCGGGCCGGCGTCCAGCTGGTTCC
CGATCCCATGATCCCCACGGAGGAGACCGGCACCCGGCACCGCACGGCGGACCGGGTCAGCAAGCAGGTCGGCTTCCCGG
TCGTCTCGGTCTCGCAGTCCATGCGCCTGATCGCCCTGTACGTCGACGGACAGCGCCGGGTCCTGGAGGACTCCGCGGCG
ATCCTGTCCCGCGCGAACCAGGCGCTGGCCACCCTGGAGCGCTACAAACTCCGCCTGGACGAGGTCGCGGGAACGTTGTC
AGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCCGCGGTGGCCCAGCGTCTGGAGATGGTGCGCCGTATCG
CCACCGAAATCGCCGAATACGTGGTCGAACTGGGCACGGACGGGCGACTGCTCGCCCTCCAGCTCGACGAGTTGATCGCG
GGCGTGGAGCCGGAGCGCGAACTGGTGGTCCGCGACTACGTCCCCGAGCCGACGGCCAAGCGTTCCCGCACGGTCGACGA
GGCGCTGCACGAGCTGGACGCGCTCACCCACGCCGAGCTCCTGGAACTGTCCACGGTCGCCCGCGCGCTCGGCTACACCG
GCTCCCCCGAAGCACTGGACTCGGCGGTCTCCCCGCGCGGGTTCCGCCTGCTGGCCAAGGTGCCGCGTCTTCCGGGGGCG
ATCATCGACCGTCTCGTGGAGCACTTCAGCAGCCTGCAGAAGCTGCTCGCCGCGAGCGTCGACGACCTCCAGACGGTGGA
CGGTGTGGGTGAGGCGCGGGCCCGCAGCGTCCGCGAGGGCCTGTCCCGACTGGCCGAGTCCTCGATCCTGGAGCGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436