Detailed information    

insolico Bioinformatically predicted

Overview

Name   hexB   Type   Machinery gene
Locus tag   C7M30_RS01610 Genome accession   NZ_CP028218
Coordinates   292018..293898 (-) Length   626 a.a.
NCBI ID   WP_160243900.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102756     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 287018..298898
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M30_RS01570 (C7M30_00318) - 287019..287765 (-) 747 WP_103747123.1 hypothetical protein -
  C7M30_RS01575 (C7M30_00319) - 288000..288542 (-) 543 WP_003220264.1 tyrosine-type recombinase/integrase -
  C7M30_RS01580 - 288542..288950 (-) 409 Protein_323 ArpU family phage packaging/lysis transcriptional regulator -
  C7M30_RS01585 (C7M30_00322) - 289295..289924 (-) 630 WP_160243896.1 hypothetical protein -
  C7M30_RS01590 (C7M30_00323) - 290196..290558 (+) 363 WP_160243897.1 Ig-like domain-containing protein -
  C7M30_RS01595 (C7M30_00324) - 290609..290857 (-) 249 WP_160243898.1 hypothetical protein -
  C7M30_RS21860 (C7M30_00325) - 290969..291406 (-) 438 WP_250622410.1 hypothetical protein -
  C7M30_RS01605 (C7M30_00326) - 291449..291646 (-) 198 WP_160243899.1 XtrA/YqaO family protein -
  C7M30_RS01610 (C7M30_00328) hexB 292018..293898 (-) 1881 WP_160243900.1 DNA mismatch repair endonuclease MutL Machinery gene
  C7M30_RS01615 (C7M30_00329) hexA 293914..296490 (-) 2577 WP_160243901.1 DNA mismatch repair protein MutS Machinery gene
  C7M30_RS01620 (C7M30_00330) cotE 296623..297168 (-) 546 WP_003231833.1 outer spore coat protein CotE -
  C7M30_RS01625 (C7M30_00331) ymcA 297430..297861 (-) 432 WP_003231834.1 regulatory iron-sulfur-containing complex subunit RicA Regulator

Sequence

Protein


Download         Length: 626 a.a.        Molecular weight: 70465.39 Da        Isoelectric Point: 5.6018

>NTDB_id=240445 C7M30_RS01610 WP_160243900.1 292018..293898(-) (hexB) [Bacillus subtilis strain SRCM102756]
MAKVIQLSDELSNKIAAGEVVERPASVVKELVENAIDADSTVIEIDIEEAGLASIRVLDNGEGMENEDCKRAFRRHATSK
IKDENDLFRVRTLGFRGEALPSIASVSHLEITTSTGEGAGTKLVLQGGNIISESRSSSRKGTEIVVSNLFFNTPARLKYM
KTVHTELGNITDVVNRIALAHPEVSIRLRHHGKNLLQTNGNGDVRHVLAAIYGTAVAKKMLPLHASSLDFEVKGYIALPE
ITRASRNYMSSVVNGRYIKNFPLVKAVHEGYHTLLPIGRHPITFIEITMDPILVDVNVHPSKLEVRLSKETELHDLIRDG
IKDVFKQQQLIPSAQLPKKSAPVIKNEQQFITFDEKPPEKKVPEKSTAPSYSPMKLSSVVKELVDVEEELPPLQFDAPPI
VDQEQTLEVSDVSEEQPETFEQECHEEQQPASERVPIMYPIGQMHGTYILAQNENGLYIIDQHAAQERIKYEYFREKVGE
VEPEVQEMIVPLTFHYSTNEALIIEQHKQELESVGVFLESFGSNSYIVRCHPAWFPKGEEAELIEEIIQQVLDSKNIDIK
KLREEAAIMMSCKGSIKANRHLRNDEIKALLDDLRSTSDPFTCPHGRPIIIHHSTYEMEKMFKRVM

Nucleotide


Download         Length: 1881 bp        

>NTDB_id=240445 C7M30_RS01610 WP_160243900.1 292018..293898(-) (hexB) [Bacillus subtilis strain SRCM102756]
GTGGCAAAAGTCATCCAGCTGTCAGATGAGCTTTCAAATAAAATAGCGGCGGGCGAGGTTGTGGAACGGCCCGCCTCAGT
CGTCAAAGAATTGGTGGAAAATGCGATCGACGCTGACAGCACAGTCATTGAAATCGATATTGAGGAAGCAGGCCTTGCAT
CCATTCGGGTCTTGGATAACGGCGAAGGAATGGAGAATGAAGATTGCAAGCGAGCTTTCCGCCGCCACGCAACGAGTAAA
ATAAAAGATGAAAATGATTTATTCAGGGTGAGAACGCTCGGTTTCAGGGGAGAAGCCCTGCCGAGTATCGCGTCAGTCTC
TCATCTGGAGATTACAACAAGCACTGGTGAAGGAGCTGGGACGAAGCTCGTCCTCCAAGGAGGAAACATCATTTCCGAAT
CGCGTTCCTCAAGCAGGAAGGGAACTGAAATTGTCGTTTCCAACCTGTTTTTTAACACACCGGCCCGTTTGAAATATATG
AAAACCGTTCATACAGAGCTTGGAAACATTACGGATGTGGTTAACCGTATTGCTCTGGCGCATCCAGAGGTATCGATCCG
CCTGCGCCATCATGGGAAAAACCTGCTTCAAACGAACGGAAACGGAGATGTGCGCCATGTACTGGCAGCGATTTACGGCA
CGGCTGTCGCCAAAAAAATGCTTCCGCTGCATGCGAGCTCCTTGGATTTTGAAGTAAAGGGATATATCGCCCTCCCAGAG
ATTACACGGGCGTCGAGAAACTATATGTCGTCTGTGGTCAATGGCCGTTACATTAAAAATTTCCCGCTCGTCAAAGCGGT
TCATGAAGGCTATCATACGCTTCTGCCGATCGGACGCCATCCGATTACTTTTATAGAAATTACGATGGACCCGATTTTAG
TCGATGTCAACGTGCATCCATCGAAGCTTGAGGTCCGGCTCAGCAAGGAAACAGAGCTTCATGACTTAATTCGTGACGGA
ATTAAAGATGTATTTAAACAGCAACAGCTGATTCCGAGTGCCCAGCTCCCGAAAAAATCGGCACCTGTTATCAAAAATGA
GCAGCAGTTCATAACCTTTGATGAAAAGCCTCCGGAAAAAAAAGTTCCGGAAAAATCGACTGCGCCATCTTATTCACCAA
TGAAGCTCAGCTCAGTCGTGAAAGAGCTGGTTGATGTGGAGGAAGAATTGCCTCCTCTCCAATTTGATGCTCCACCTATC
GTTGATCAGGAACAAACCCTTGAGGTGTCCGATGTTTCAGAAGAACAGCCTGAAACATTTGAGCAGGAATGCCATGAGGA
ACAGCAGCCAGCGTCTGAGCGGGTTCCAATTATGTACCCGATCGGCCAGATGCACGGGACTTATATATTGGCACAAAACG
AAAACGGCCTATATATTATCGACCAGCACGCCGCCCAAGAACGTATTAAATATGAGTACTTTCGTGAAAAGGTGGGGGAG
GTTGAGCCTGAGGTGCAGGAGATGATTGTACCGCTGACGTTCCACTACTCCACAAATGAGGCTTTGATTATTGAACAGCA
CAAACAAGAGCTCGAAAGCGTCGGTGTCTTTTTAGAGTCATTCGGCTCTAACAGTTACATCGTCCGCTGCCACCCGGCCT
GGTTTCCAAAGGGAGAAGAAGCAGAGCTCATAGAAGAAATCATTCAGCAGGTGCTCGACTCCAAAAATATAGATATTAAA
AAACTCCGTGAGGAAGCGGCGATTATGATGAGCTGCAAAGGCTCCATCAAAGCAAATCGCCACCTCAGAAACGACGAAAT
CAAAGCGCTTCTGGACGACCTCCGAAGCACATCAGACCCATTTACATGCCCGCACGGCCGCCCGATCATCATTCACCACT
CGACATATGAGATGGAAAAGATGTTCAAACGCGTGATGTAG

Domains

Predicted by InterProScan.

MutL C terminal dimerisation domain (MutL_C)

(441-582)

DNA mismatch repair protein, C-terminal domain (DNA_mis_repair)

(209-324)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c_3)

(25-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  hexB Streptococcus pneumoniae R6

46.322

100

0.473