Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   C7M28_RS06755 Genome accession   NZ_CP028215
Coordinates   1271627..1272490 (-) Length   287 a.a.
NCBI ID   WP_014480705.1    Uniprot ID   Q9FAF1
Organism   Bacillus subtilis strain SRCM102750     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 1266627..1277490
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M28_RS06720 (C7M28_01324) mrpE 1266793..1267269 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  C7M28_RS06725 (C7M28_01325) mrpF 1267269..1267553 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  C7M28_RS06730 (C7M28_01326) mnhG 1267537..1267911 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  C7M28_RS06735 (C7M28_01327) yuxO 1267952..1268332 (-) 381 WP_014477831.1 hotdog fold thioesterase -
  C7M28_RS06740 (C7M28_01328) comA 1268351..1268995 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  C7M28_RS06745 (C7M28_01329) comP 1269076..1271388 (-) 2313 WP_041332996.1 sensor histidine kinase Regulator
  C7M28_RS06750 (C7M28_01330) comX 1271404..1271625 (-) 222 WP_014480704.1 competence pheromone ComX -
  C7M28_RS06755 (C7M28_01331) comQ 1271627..1272490 (-) 864 WP_014480705.1 polyprenyl synthetase family protein Regulator
  C7M28_RS06760 (C7M28_01332) degQ 1272675..1272815 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  C7M28_RS06765 (C7M28_01333) - 1273037..1273162 (+) 126 WP_003228793.1 hypothetical protein -
  C7M28_RS06770 (C7M28_01334) - 1273277..1273645 (+) 369 WP_046381300.1 hypothetical protein -
  C7M28_RS06775 (C7M28_01335) pdeH 1273621..1274850 (-) 1230 WP_046381301.1 cyclic di-GMP phosphodiesterase -
  C7M28_RS06780 (C7M28_01336) pncB 1274987..1276459 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  C7M28_RS06785 (C7M28_01337) pncA 1276475..1277026 (-) 552 WP_014477836.1 isochorismatase family cysteine hydrolase -

Sequence


Protein


Download         Length: 287 a.a.        Molecular weight: 32882.57 Da        Isoelectric Point: 5.2201

>NTDB_id=240182 C7M28_RS06755 WP_014480705.1 1271627..1272490(-) (comQ) [Bacillus subtilis strain SRCM102750]
MKEIVDENILNEDLKVKLISFIKEKKQFSFAELAYYHYIAFDGKNDKAIELLASGIELLILSADIFDDIEDKDNLQASWM
KLDPSIATNAATALYTLSLQVIGSVSNHPKLLSLTLQYSLQSLQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSILGV
YLATGEYNETVEEYSRYLGIVEQIANDHYGLYYPNYNDFKTRHTLAFNYLKNKFNQSSIDLLNFYAQENHMINNLEDLKG
KLRESGVIQYLNVIKNLAVENFKESFKKLRLDEQRKNKLLIQLLRGI

Nucleotide


Download         Length: 864 bp        

>NTDB_id=240182 C7M28_RS06755 WP_014480705.1 1271627..1272490(-) (comQ) [Bacillus subtilis strain SRCM102750]
ATGAAGGAGATTGTGGATGAAAATATTTTAAATGAGGACTTAAAAGTGAAGCTCATTTCTTTTATCAAAGAAAAAAAACA
ATTTTCATTTGCAGAACTGGCTTATTACCATTACATAGCATTTGATGGAAAAAACGACAAAGCAATTGAGTTATTGGCGT
CAGGTATAGAACTTTTAATTTTATCTGCGGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAATTAGATCCTTCTATAGCAACTAACGCAGCTACCGCACTTTATACATTAAGTCTGCAAGTAATAGGTTCAGTCTCAAA
TCATCCAAAACTTTTAAGCCTTACTTTGCAATATTCACTCCAATCTTTACAAGGACAACATGTAGATTTGAATTTAACAG
CCTCATCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCGGGTTCTCTGGTAACATTGCCCAGTATTCTTGGTGTA
TATCTGGCAACTGGAGAATATAATGAAACAGTTGAGGAGTATTCACGTTATTTAGGTATAGTCGAGCAAATTGCAAATGA
TCACTATGGACTTTATTACCCTAACTATAATGACTTCAAAACTAGACATACGCTTGCCTTCAATTATCTTAAAAATAAAT
TTAACCAATCATCAATTGACTTATTAAATTTTTATGCGCAAGAAAATCATATGATAAATAATTTGGAAGATTTGAAGGGA
AAGTTAAGAGAATCAGGTGTAATACAATATTTGAATGTTATAAAAAATTTAGCAGTGGAAAATTTTAAGGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAAAATAAATTACTTATTCAATTATTAAGGGGGATTTAA

Domains


Predicted by InterProScan.

(45-195)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q9FAF1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45

97.561

0.439


Multiple sequence alignment