Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   C7M28_RS05945 Genome accession   NZ_CP028215
Coordinates   1128694..1129389 (-) Length   231 a.a.
NCBI ID   WP_033884849.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM102750     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1123694..1134389
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7M28_RS05925 (C7M28_01166) yttA 1124121..1124867 (+) 747 WP_046381284.1 LMBR1 domain-containing protein -
  C7M28_RS05930 (C7M28_01167) bceB 1124904..1126844 (-) 1941 WP_069704044.1 bacitracin ABC transporter permease BceB -
  C7M28_RS05935 (C7M28_01168) bceA 1126834..1127595 (-) 762 WP_003229137.1 bacitracin ABC transporter ATP-binding protein BceA -
  C7M28_RS05940 (C7M28_01169) bceS 1127697..1128701 (-) 1005 WP_046381286.1 two-component sensor histidine kinase BceS -
  C7M28_RS05945 (C7M28_01170) braR 1128694..1129389 (-) 696 WP_033884849.1 two-component response regulator BceR Regulator
  C7M28_RS05950 (C7M28_01171) ytrF 1129486..1130796 (-) 1311 WP_015251399.1 ABC transporter permease YtrF -
  C7M28_RS05955 (C7M28_01172) ytrE 1130786..1131481 (-) 696 WP_003229129.1 ABC transporter ATP-binding protein YtrE -
  C7M28_RS05960 (C7M28_01173) ytrD 1131496..1132473 (-) 978 WP_004398887.1 ABC transporter permease YtrD -
  C7M28_RS05965 (C7M28_01174) ytrC 1132503..1133489 (-) 987 WP_046381287.1 ABC transporter permease YtrC -
  C7M28_RS05970 (C7M28_01175) ytrB 1133483..1134361 (-) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26893.77 Da        Isoelectric Point: 5.3731

>NTDB_id=240179 C7M28_RS05945 WP_033884849.1 1128694..1129389(-) (braR) [Bacillus subtilis strain SRCM102750]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPNTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDALQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=240179 C7M28_RS05945 WP_033884849.1 1128694..1129389(-) (braR) [Bacillus subtilis strain SRCM102750]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATCCAAAAGCCATTTCATTTTGATGT
GCTGATTGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAATACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAAATGTTCATT
CTAAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTTCGAAAAAAACTGGACGCCCTGCAGCTTGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377