Detailed information
Bioinformatically predicted
Overview
| Name | pilA2 | Type | Machinery gene |
| Locus tag | LPL_RS09445 | Genome accession | NC_006369 |
| Coordinates | 2104142..2104555 (-) | Length | 137 a.a. |
| NCBI ID | WP_011215876.1 | Uniprot ID | - |
| Organism | Legionella pneumophila str. Lens | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2099142..2109555
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LPL_RS09435 (lpl1876) | letS | 2100071..2102803 (+) | 2733 | WP_011215874.1 | two-component system sensor histidine kinase LetS | Regulator |
| LPL_RS09440 (lpl1877) | - | 2102901..2104145 (+) | 1245 | WP_011215875.1 | 6-phosphofructokinase | - |
| LPL_RS09445 (lpl1878) | pilA2 | 2104142..2104555 (-) | 414 | WP_011215876.1 | pilin | Machinery gene |
| LPL_RS09450 (lpl1879) | pilA2 | 2104753..2105166 (-) | 414 | WP_011215877.1 | pilin | Machinery gene |
| LPL_RS09455 (lpl1880) | - | 2105468..2105785 (+) | 318 | WP_011215878.1 | BolA family protein | - |
| LPL_RS09460 (lpl1881) | - | 2105860..2107281 (+) | 1422 | WP_011215879.1 | APC family permease | - |
| LPL_RS09465 (lpl1882) | - | 2107410..2108840 (-) | 1431 | WP_011215880.1 | cellulase family glycosylhydrolase | - |
Sequence
Protein
Download Length: 137 a.a. Molecular weight: 14602.05 Da Isoelectric Point: 8.4590
>NTDB_id=23850 LPL_RS09445 WP_011215876.1 2104142..2104555(-) (pilA2) [Legionella pneumophila str. Lens]
MRTKGFTLIELMIVATILGVLLAIAFPAYHDYTIRVRVAEGLEKASFAKLAVAEKILIDNILPANQADTGYTSPAPTINV
ASIAIGNQGIITITYTANAGNGTITMVPTLDATGRILTWDCTGGTLISKYRPAYCRP
MRTKGFTLIELMIVATILGVLLAIAFPAYHDYTIRVRVAEGLEKASFAKLAVAEKILIDNILPANQADTGYTSPAPTINV
ASIAIGNQGIITITYTANAGNGTITMVPTLDATGRILTWDCTGGTLISKYRPAYCRP
Nucleotide
Download Length: 414 bp
>NTDB_id=23850 LPL_RS09445 WP_011215876.1 2104142..2104555(-) (pilA2) [Legionella pneumophila str. Lens]
ATGAGAACGAAAGGATTTACTTTAATCGAGCTGATGATCGTTGCTACTATCCTTGGGGTTCTGCTTGCCATCGCTTTCCC
AGCCTATCATGATTATACTATCAGAGTGCGGGTGGCTGAAGGATTGGAAAAGGCGTCATTTGCAAAATTAGCTGTTGCTG
AGAAGATTTTGATAGATAACATATTGCCAGCAAATCAGGCAGATACGGGTTATACCAGTCCTGCCCCAACAATTAATGTA
GCCTCTATAGCCATTGGTAATCAAGGCATTATTACCATTACCTACACAGCAAACGCAGGTAATGGTACTATTACAATGGT
TCCTACATTAGACGCTACAGGCAGAATACTCACTTGGGATTGCACTGGTGGTACCCTGATTAGTAAATATCGTCCAGCCT
ACTGCCGCCCTTAA
ATGAGAACGAAAGGATTTACTTTAATCGAGCTGATGATCGTTGCTACTATCCTTGGGGTTCTGCTTGCCATCGCTTTCCC
AGCCTATCATGATTATACTATCAGAGTGCGGGTGGCTGAAGGATTGGAAAAGGCGTCATTTGCAAAATTAGCTGTTGCTG
AGAAGATTTTGATAGATAACATATTGCCAGCAAATCAGGCAGATACGGGTTATACCAGTCCTGCCCCAACAATTAATGTA
GCCTCTATAGCCATTGGTAATCAAGGCATTATTACCATTACCTACACAGCAAACGCAGGTAATGGTACTATTACAATGGT
TCCTACATTAGACGCTACAGGCAGAATACTCACTTGGGATTGCACTGGTGGTACCCTGATTAGTAAATATCGTCCAGCCT
ACTGCCGCCCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA2 | Legionella pneumophila str. Paris |
69.343 |
100 |
0.693 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
68.613 |
100 |
0.686 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
43.902 |
100 |
0.526 |
| comP | Acinetobacter baylyi ADP1 |
45.517 |
100 |
0.482 |
| pilA/pilA1 | Eikenella corrodens VA1 |
36.129 |
100 |
0.409 |
| pilE | Neisseria gonorrhoeae MS11 |
34.615 |
100 |
0.394 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
34.667 |
100 |
0.38 |
| pilA | Vibrio cholerae strain A1552 |
34.667 |
100 |
0.38 |
| pilA | Vibrio cholerae C6706 |
34.667 |
100 |
0.38 |