Detailed information NTG0237482

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: CEW87_RS02750
• Genome accession: NZ_CP022188
• Coordinates: 593986..595350 (-)
• Length: 454 a.a.
• NCBI ID: WP_108971361.1
• Uniprot ID: A0A2U8GY42
• Organism: Parazoarcus communis strain TSNA42
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 588986..600350

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CEW87_RS02735 (CEW87_02735)	-	589937..591565 (-)	1629	WP_108971358.1	ArnT family glycosyltransferase	-
CEW87_RS02740 (CEW87_02740)	-	591568..592575 (-)	1008	WP_108971359.1	NAD-dependent epimerase	-
CEW87_RS02745 (CEW87_02745)	waaA	592691..593950 (+)	1260	WP_108971360.1	lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	-
CEW87_RS02750 (CEW87_02750)	pilR	593986..595350 (-)	1365	WP_108971361.1	sigma-54-dependent transcriptional regulator	Regulator
CEW87_RS02755 (CEW87_02755)	-	595347..596903 (-)	1557	WP_108971362.1	sensor histidine kinase	-
CEW87_RS02760 (CEW87_02760)	-	596906..597142 (-)	237	WP_108971363.1	PP0621 family protein	-
CEW87_RS02765 (CEW87_02765)	-	597281..598441 (-)	1161	WP_108971364.1	pyridoxal phosphate-dependent aminotransferase	-
CEW87_RS02770 (CEW87_02770)	mtnA	598660..599730 (+)	1071	WP_108971365.1	S-methyl-5-thioribose-1-phosphate isomerase	-

Sequence

Protein

• Length: 454 a.a.
• Molecular weight: 49869.68 Da
• Isoelectric Point: 5.0255

>NTDB_id=237482 CEW87_RS02750 WP_108971361.1 593986..595350(-) (pilR) [Parazoarcus communis strain TSNA42]
MSVSDRRNRSASVDVLVIDDEEDIRELLELSLMRMGLGCDAAGTVAEARTLLEGRRYRLCLTDMRLPDGDGLELVEHIQR
QYPGLPVAVITAFGSIETAIRALKVGAFDFVTKPVELKALRELVTHALKLQAPSDEAQGEGGRKLIGTSAALAQLRVQVE
KLARNQAPVFIHGESGTGKEVIARLIHSLGARAAAPFVPVNCGAISPELMESEFFGHRKGSFTGAATDKEGLFQAANGGT
LFLDEVGELPLSMQVKLLRAIQERAVRPVGAHAEESVDVRILSASHRDLAQLVNENRFRQDLYFRINVITLRVPPLRERP
EDIPDLAAHVLGRLAEREGGAVRQLSPDALAALSRHSFPGNVRELENLLERACALCESDQITAADLDLQQCEGLTQTGLD
LDTGEDDDVADSDDERINVLRALDENRWNRSAAARQLGMTLRQLRYRLQKWGMD

Nucleotide

• Length: 1365 bp

>NTDB_id=237482 CEW87_RS02750 WP_108971361.1 593986..595350(-) (pilR) [Parazoarcus communis strain TSNA42]
ATGAGCGTTTCAGATCGCCGTAACCGCAGCGCCAGCGTGGATGTGCTGGTGATCGATGACGAGGAAGATATCCGCGAACT
GCTCGAGCTCTCGCTGATGCGCATGGGGCTGGGTTGCGATGCAGCGGGCACGGTGGCCGAAGCCAGGACCCTGCTCGAAG
GTCGCCGCTATCGCCTCTGCCTGACCGACATGCGACTTCCCGATGGCGACGGGCTGGAGCTGGTTGAGCACATCCAGCGC
CAGTACCCGGGCCTGCCGGTGGCCGTGATCACCGCCTTTGGCAGTATCGAGACCGCGATCCGTGCGCTCAAGGTCGGCGC
CTTCGATTTCGTGACCAAGCCGGTTGAGCTCAAGGCCTTGCGCGAACTGGTGACGCACGCACTGAAGCTGCAGGCGCCGT
CGGATGAGGCGCAGGGCGAAGGCGGGCGCAAGCTGATCGGGACCTCGGCTGCGCTGGCGCAGTTGCGGGTGCAGGTCGAG
AAGCTGGCGCGCAATCAGGCGCCGGTCTTCATCCATGGGGAGTCAGGTACGGGCAAGGAAGTGATCGCGCGCCTGATCCA
CAGTCTTGGAGCGCGGGCGGCCGCCCCCTTCGTGCCGGTAAACTGCGGTGCGATCTCGCCGGAGCTGATGGAGAGCGAGT
TCTTCGGTCATCGCAAGGGCAGCTTCACCGGTGCGGCGACCGACAAGGAAGGGTTGTTCCAGGCTGCAAACGGCGGCACC
CTGTTCCTCGACGAGGTCGGCGAGCTGCCCCTGTCGATGCAGGTCAAGCTCTTGCGTGCCATCCAGGAGCGCGCAGTGCG
CCCGGTCGGTGCGCATGCCGAAGAATCGGTCGATGTCCGCATTCTCTCTGCGTCGCACCGCGACCTGGCGCAGCTGGTGA
ATGAAAACCGCTTCCGTCAGGATCTCTACTTCCGCATCAACGTGATCACCCTGCGGGTGCCGCCGCTGCGGGAGCGTCCG
GAAGACATTCCCGATCTTGCTGCGCATGTGCTCGGACGACTGGCCGAGCGTGAGGGCGGGGCGGTCCGGCAGTTGTCGCC
CGATGCGCTTGCTGCCCTCTCCCGACACAGCTTTCCGGGTAATGTGCGCGAGCTGGAAAACCTGCTCGAGCGTGCCTGTG
CGCTGTGCGAATCCGACCAGATCACTGCTGCCGATCTCGATCTGCAGCAGTGCGAGGGGCTGACGCAGACGGGGCTCGAC
CTGGACACGGGCGAAGACGACGATGTGGCCGACTCCGACGACGAGCGCATCAATGTCTTGCGTGCGCTCGACGAAAACCG
CTGGAACCGCTCTGCTGCGGCGCGCCAGCTCGGCATGACCTTGCGTCAGCTACGCTACCGTCTGCAGAAATGGGGCATGG
ACTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (420-451)

• Response regulator receiver domain (Response_reg) (15-124)

• Sigma-54 interaction domain (Sigma54_activat) (145-311)

3D structure

• AlphaFold DB: A0A2U8GY42

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	60.317	97.137	0.586
pilR	Acinetobacter baumannii strain A118	47.391	100	0.48