Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | CE462_RS19115 | Genome accession | NZ_CP022186 |
| Coordinates | 3905646..3905966 (+) | Length | 106 a.a. |
| NCBI ID | WP_005318073.1 | Uniprot ID | A4SJ96 |
| Organism | Aeromonas salmonicida strain S68 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3900646..3910966
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CE462_RS19090 (CE462_19090) | trhA | 3901271..3901906 (-) | 636 | WP_017412882.1 | PAQR family membrane homeostasis protein TrhA | - |
| CE462_RS19095 (CE462_19095) | - | 3902131..3903666 (+) | 1536 | WP_034283547.1 | pyridoxal-dependent decarboxylase | - |
| CE462_RS19100 (CE462_19100) | - | 3903752..3904303 (+) | 552 | WP_005318063.1 | septation protein A | - |
| CE462_RS19105 (CE462_19105) | - | 3904330..3904626 (+) | 297 | WP_005318066.1 | YciI family protein | - |
| CE462_RS19110 (CE462_19110) | cysQ | 3904708..3905478 (-) | 771 | WP_005318069.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| CE462_RS19115 (CE462_19115) | comEA | 3905646..3905966 (+) | 321 | WP_005318073.1 | ComEA family DNA-binding protein | Machinery gene |
| CE462_RS19120 (CE462_19120) | galU | 3906061..3906972 (+) | 912 | WP_005318075.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| CE462_RS19125 (CE462_19125) | - | 3907186..3908583 (+) | 1398 | WP_017412884.1 | peptide MFS transporter | - |
| CE462_RS19130 (CE462_19130) | - | 3908659..3909630 (-) | 972 | WP_011898383.1 | response regulator | - |
| CE462_RS19135 (CE462_19135) | - | 3909984..3910682 (+) | 699 | WP_005318084.1 | DnaT-like ssDNA-binding domain-containing protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11222.15 Da Isoelectric Point: 10.0215
>NTDB_id=237446 CE462_RS19115 WP_005318073.1 3905646..3905966(+) (comEA) [Aeromonas salmonicida strain S68]
MNYKILTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFRQKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
MNYKILTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFRQKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=237446 CE462_RS19115 WP_005318073.1 3905646..3905966(+) (comEA) [Aeromonas salmonicida strain S68]
ATGAACTACAAAATCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTTTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCCCTCAAGGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTCAGAAACAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCCACTCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
ATGAACTACAAAATCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTTTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCCCTCAAGGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTCAGAAACAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCCACTCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
50 |
100 |
0.519 |
| comEA | Vibrio cholerae strain A1552 |
50 |
100 |
0.519 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
46.392 |
91.509 |
0.425 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
42.453 |
100 |
0.425 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
61.905 |
59.434 |
0.368 |