Detailed information NTG0235576

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: CEA93_RS09375
• Genome accession: NZ_CP021980
• Coordinates: 2003925..2006168 (-)
• Length: 747 a.a.
• NCBI ID: WP_029189791.1
• Uniprot ID: -
• Organism: Vibrio anguillarum strain 87-9-116
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1998925..2011168

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CEA93_RS09350 (CEA93_09350)	-	1999660..2000178 (+)	519	WP_013856537.1	cytochrome b	-
CEA93_RS09355 (CEA93_09355)	kdsB	2000221..2000973 (-)	753	WP_013856536.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
CEA93_RS09360 (CEA93_09360)	-	2000973..2001152 (-)	180	WP_013856535.1	Trm112 family protein	-
CEA93_RS09365 (CEA93_09365)	lpxK	2001133..2002140 (-)	1008	WP_013856534.1	tetraacyldisaccharide 4'-kinase	-
CEA93_RS09370 (CEA93_09370)	msbA	2002144..2003892 (-)	1749	WP_013856533.1	lipid A ABC transporter ATP-binding protein/permease MsbA	-
CEA93_RS09375 (CEA93_09375)	comEC	2003925..2006168 (-)	2244	WP_029189791.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
CEA93_RS09380 (CEA93_09380)	-	2006175..2006684 (+)	510	WP_010319231.1	DUF2062 domain-containing protein	-
CEA93_RS09385 (CEA93_09385)	lolE	2006823..2008067 (-)	1245	WP_013856531.1	lipoprotein-releasing ABC transporter permease subunit LolE	-
CEA93_RS09390 (CEA93_09390)	lolD	2008068..2008754 (-)	687	WP_013856530.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
CEA93_RS09395 (CEA93_09395)	lolC	2008747..2009955 (-)	1209	WP_013856529.1	lipoprotein-releasing ABC transporter permease subunit LolC	-
CEA93_RS09400 (CEA93_09400)	-	2010121..2010690 (+)	570	WP_013856528.1	hypothetical protein	-

Sequence

Protein

• Length: 747 a.a.
• Molecular weight: 83533.44 Da
• Isoelectric Point: 9.4397

>NTDB_id=235576 CEA93_RS09375 WP_029189791.1 2003925..2006168(-) (comEC) [Vibrio anguillarum strain 87-9-116]
MTLLSNYWTLASFSLTAISASYWPWMPDWKWIMPLFAILILSVVYRKLRFLSGVTMALMVIVISGNLLREQSNTIFQTGS
DITINGQVNSFFRQITHGYEGTISIRSINGQTLGIFLRPKVRLIAPLPLKYGDVAEFSITVKPIFGRLNETGFDAEAYSL
SQGIVARATVNNGQSYRIESLPEWRAQWYQKIKTWLADDPNLGILMALTFGERSDISTAQWQALRDSGLIHLVAISGLHI
GIAFGFGYSLGLVLMRLHHRMGWSPFVVGSLCALGYAWLAGFTLPTQRALIMCLLNVAMIVLNVRINTLQRLLMTLSAVL
LIDPFAALSSSFWMSFIAVSVVFYQLSLPQTNRFFLWRLLTMQIGLVLCMLPVTAYFFGGVSTSAALYNLVFIPWFSFVV
VPAIFVALVCTFLTFDGAPMVWHWVAKLLIPVDWSIHYSSLSWFPISGAVLALLSSALLLFVFSPLISRFALAVYSLIVM
VSWLTIPIKTGWRIDVLDVGHGLAVLIEKEGRYVLYDTGASWQGGDHIQATVAPVLNKRGATQLDGLILSHLDNDHAGGR
AEVERVWQPKWKRASQTIAGYQPCIAGEQWQWQQLSFDVIWPPKTVARAYNPHSCVIRIFDQNTGFSVLLPGDVDAMSEW
LLARTEQSLQSHILLVPHHGSRTSSTVALISKVNPEVAIASLAKGGRWQLPSAQVVQRYQQHGANWLDTGEAGQISVIFG
MQNYQVSSLRISRSQAWYRQMLRNEVE

Nucleotide

• Length: 2244 bp

>NTDB_id=235576 CEA93_RS09375 WP_029189791.1 2003925..2006168(-) (comEC) [Vibrio anguillarum strain 87-9-116]
ATGACTCTCTTATCTAATTACTGGACCCTAGCTTCGTTTTCGCTAACCGCCATTTCTGCTTCTTATTGGCCTTGGATGCC
AGATTGGAAATGGATTATGCCTCTATTCGCCATTCTTATACTCTCTGTCGTTTATAGAAAACTGCGCTTTCTCTCAGGAG
TAACAATGGCTTTAATGGTCATTGTGATCAGCGGGAACTTATTACGTGAGCAGTCCAACACTATTTTTCAGACAGGTTCG
GATATTACCATAAACGGACAGGTTAACAGCTTTTTTAGACAAATTACTCATGGTTATGAAGGAACAATTTCGATTCGATC
AATCAATGGTCAAACCTTAGGCATTTTTTTGCGGCCCAAGGTGCGATTAATAGCTCCTTTACCGTTGAAGTATGGTGACG
TGGCTGAATTCTCCATCACAGTAAAACCTATCTTTGGTCGGTTAAATGAGACCGGGTTTGATGCAGAGGCGTACTCTTTG
AGCCAAGGTATTGTGGCTCGTGCAACGGTTAATAATGGACAGTCTTATCGCATTGAATCATTACCAGAATGGCGAGCGCA
ATGGTACCAGAAGATCAAAACCTGGCTCGCTGATGATCCCAATCTTGGTATTTTAATGGCGCTTACGTTTGGTGAGCGCA
GTGATATTTCAACGGCACAGTGGCAAGCATTACGAGACAGTGGGCTGATTCATTTGGTTGCCATTTCTGGTCTGCACATT
GGCATCGCGTTTGGTTTTGGTTATAGCCTTGGGCTCGTATTGATGCGTTTGCATCATCGCATGGGGTGGTCGCCATTCGT
CGTAGGAAGCTTGTGCGCACTAGGCTATGCTTGGTTGGCTGGCTTTACCTTGCCCACTCAACGCGCGCTCATCATGTGTT
TGCTCAATGTGGCGATGATTGTTCTCAATGTCCGTATCAATACTTTGCAGCGACTGCTTATGACGTTATCGGCGGTGCTG
CTCATCGATCCTTTTGCTGCGTTATCCAGTAGCTTTTGGATGTCCTTTATTGCTGTCTCAGTGGTGTTCTACCAACTTTC
TCTACCTCAAACTAATCGATTTTTTTTATGGCGTTTATTGACGATGCAGATTGGGTTAGTGCTGTGTATGCTTCCGGTAA
CCGCTTATTTTTTCGGTGGGGTCAGTACCAGTGCGGCGCTCTATAACTTAGTGTTTATTCCTTGGTTCAGTTTTGTGGTG
GTTCCGGCGATCTTTGTGGCTTTAGTCTGTACGTTTTTGACTTTTGATGGCGCACCTATGGTGTGGCATTGGGTGGCCAA
ATTGCTCATTCCAGTTGATTGGTCAATACATTATTCAAGCCTCAGTTGGTTTCCTATTTCTGGGGCTGTTTTGGCTCTGT
TGAGCAGTGCTCTGTTGCTGTTTGTGTTTTCACCGTTGATCTCGCGTTTTGCACTTGCGGTTTACAGCCTCATTGTGATG
GTTTCTTGGCTCACCATTCCGATAAAAACAGGTTGGCGGATTGATGTGTTAGATGTTGGGCATGGGTTAGCGGTGTTGAT
CGAAAAAGAAGGACGCTACGTGCTTTATGATACTGGTGCAAGTTGGCAAGGTGGTGATCACATCCAAGCAACAGTTGCCC
CCGTGTTAAACAAACGGGGAGCTACGCAATTAGACGGGTTGATTTTGAGTCACTTGGATAACGACCATGCAGGTGGAAGA
GCGGAAGTTGAGCGTGTTTGGCAGCCCAAATGGAAACGTGCTAGTCAAACGATAGCGGGTTACCAACCTTGTATTGCTGG
CGAACAATGGCAGTGGCAACAACTCTCTTTTGATGTTATCTGGCCACCAAAAACTGTAGCGCGGGCTTACAATCCTCACT
CTTGTGTGATTCGAATCTTTGACCAAAATACCGGTTTTTCAGTGCTTTTACCCGGGGATGTGGATGCTATGAGTGAGTGG
TTACTTGCGCGAACAGAGCAATCCTTACAAAGTCATATCCTGCTTGTACCACACCACGGTAGTAGGACATCTTCTACTGT
TGCTTTGATTAGTAAGGTGAACCCTGAAGTCGCTATTGCCTCGCTCGCTAAAGGCGGACGCTGGCAATTACCTTCCGCAC
AGGTTGTTCAACGCTACCAACAACATGGAGCAAACTGGTTGGATACGGGTGAAGCAGGGCAAATTAGCGTTATTTTTGGC
ATGCAGAATTATCAAGTTAGCAGCTTGCGTATCTCTCGCTCTCAGGCTTGGTATAGGCAGATGCTCCGTAACGAGGTAGA
ATGA

Domains

Predicted by InterProScan.

• Domain of unknown function (DUF4131) (DUF4131) (24-172)

• Metallo-beta-lactamase superfamily (Lactamase_B) (499-681)

• Competence protein (Competence) (208-462)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Vibrio cholerae strain A1552	51.872	100	0.519
comEC	Vibrio parahaemolyticus RIMD 2210633	43.931	100	0.446
comEC	Vibrio campbellii strain DS40M4	43.857	100	0.444