Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   S100141_RS06870 Genome accession   NZ_CP021669
Coordinates   1278094..1278570 (+) Length   158 a.a.
NCBI ID   WP_003182174.1    Uniprot ID   A0A1Y0YPP5
Organism   Bacillus licheniformis strain SRCM100141     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1273094..1283570
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  S100141_RS06835 (S100141_01390) - 1273649..1273951 (+) 303 WP_003182160.1 hypothetical protein -
  S100141_RS06840 (S100141_01391) - 1274186..1275160 (+) 975 WP_114555279.1 alpha/beta hydrolase -
  S100141_RS06845 (S100141_01392) - 1275227..1275469 (+) 243 WP_080623985.1 hypothetical protein -
  S100141_RS06850 (S100141_01393) - 1275597..1276001 (+) 405 WP_223307095.1 hypothetical protein -
  S100141_RS06855 (S100141_01394) - 1276143..1276739 (+) 597 WP_003182167.1 SAM-dependent methyltransferase -
  S100141_RS06860 (S100141_01395) - 1276845..1277324 (+) 480 WP_025807833.1 YdhH/YoaO family protein -
  S100141_RS06865 (S100141_01396) - 1277358..1277933 (+) 576 WP_021837496.1 GNAT family N-acetyltransferase -
  S100141_RS06870 (S100141_01397) rok 1278094..1278570 (+) 477 WP_003182174.1 hypothetical protein Regulator
  S100141_RS25570 (S100141_01398) - 1278689..1278862 (+) 174 WP_003182176.1 hypothetical protein -
  S100141_RS06875 (S100141_01399) - 1279211..1279831 (-) 621 WP_003182178.1 hypothetical protein -
  S100141_RS06880 (S100141_01400) - 1280542..1281126 (+) 585 WP_003182180.1 TetR family transcriptional regulator -
  S100141_RS06885 (S100141_01401) - 1281207..1281542 (+) 336 WP_011198004.1 DMT family transporter -
  S100141_RS06890 (S100141_01402) - 1281542..1281859 (+) 318 WP_025807834.1 DMT family transporter -
  S100141_RS06895 speG 1281888..1282419 (+) 532 Protein_1353 spermidine N1-acetyltransferase -
  S100141_RS06900 (S100141_01405) - 1282457..1282783 (-) 327 WP_206696990.1 YxeA family protein -
  S100141_RS06905 (S100141_01406) - 1282996..1283430 (+) 435 WP_003182188.1 hypothetical protein -

Sequence

Protein


Download         Length: 158 a.a.        Molecular weight: 18302.15 Da        Isoelectric Point: 10.1366

>NTDB_id=232355 S100141_RS06870 WP_003182174.1 1278094..1278570(+) (rok) [Bacillus licheniformis strain SRCM100141]
MFNEREALRLRLEQLGDAEIQVMRELRKEREGIYSKLRELDRESEPAINKKSSLIDLASAAAEELKQSQHAADKHPPIKT
PSHTIFQSKTTIQREAAINILSRYEEGLKGIKLKTEIEKETGFPIKNMTTFMKSLMKHRPDIKKPARGHYILHKEKDL

Nucleotide


Download         Length: 477 bp        

>NTDB_id=232355 S100141_RS06870 WP_003182174.1 1278094..1278570(+) (rok) [Bacillus licheniformis strain SRCM100141]
ATGTTCAACGAAAGAGAAGCGTTGCGTTTGAGACTTGAACAGCTAGGTGATGCGGAGATCCAGGTGATGCGGGAATTGCG
AAAAGAACGAGAGGGCATTTATTCGAAGCTGCGTGAATTGGATCGGGAGAGTGAGCCTGCAATTAACAAAAAATCTTCAT
TAATCGACTTGGCAAGCGCTGCAGCAGAGGAATTAAAACAATCCCAGCATGCCGCTGACAAACATCCGCCTATCAAGACC
CCATCTCATACTATTTTCCAATCAAAAACAACCATACAGCGTGAGGCTGCCATAAACATTTTAAGCCGCTATGAAGAGGG
CTTGAAAGGCATTAAGCTCAAAACTGAAATCGAGAAAGAAACCGGCTTTCCGATTAAAAACATGACGACATTTATGAAGA
GCTTAATGAAACATCGCCCAGATATTAAAAAGCCTGCCCGCGGCCATTATATTTTGCATAAAGAAAAAGACCTTTGA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1Y0YPP5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

45.055

100

0.519

Multiple sequence alignment