Detailed information
Bioinformatically predicted
Overview
| Name | pilX | Type | Machinery gene |
| Locus tag | CCD83_RS03200 | Genome accession | NZ_CP021521 |
| Coordinates | 551224..551697 (+) | Length | 157 a.a. |
| NCBI ID | WP_180299614.1 | Uniprot ID | - |
| Organism | Neisseria meningitidis strain 09-292 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 546224..556697
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCD83_RS03175 (CCD83_03190) | dnaB | 546664..548070 (+) | 1407 | WP_002225362.1 | replicative DNA helicase | - |
| CCD83_RS03180 (CCD83_03200) | pilH | 548379..549047 (+) | 669 | WP_149385371.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| CCD83_RS03185 (CCD83_03205) | pilV | 549077..549697 (+) | 621 | WP_096123540.1 | type IV pilus modification protein PilV | Machinery gene |
| CCD83_RS03190 (CCD83_03210) | pilJ | 549694..550647 (+) | 954 | WP_149385334.1 | PilW family protein | Machinery gene |
| CCD83_RS03195 (CCD83_03215) | pilK | 550626..551219 (+) | 594 | WP_002229321.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| CCD83_RS03200 (CCD83_03220) | pilX | 551224..551697 (+) | 474 | WP_180299614.1 | PilX family type IV pilin | Machinery gene |
| CCD83_RS03205 (CCD83_03230) | - | 552601..553029 (-) | 429 | Protein_542 | AzlC family ABC transporter permease | - |
| CCD83_RS03210 (CCD83_03235) | dut | 553171..553623 (+) | 453 | WP_002229326.1 | dUTP diphosphatase | - |
| CCD83_RS03215 (CCD83_03240) | dapC | 553700..554887 (+) | 1188 | WP_002259885.1 | succinyldiaminopimelate transaminase | - |
| CCD83_RS03220 (CCD83_03245) | yaaA | 555050..555829 (+) | 780 | WP_002229325.1 | peroxide stress protein YaaA | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 17500.24 Da Isoelectric Point: 9.1946
>NTDB_id=231729 CCD83_RS03200 WP_180299614.1 551224..551697(+) (pilX) [Neisseria meningitidis strain 09-292]
MEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIEKGYQSQLYTEMVGINNISKQFILKNPLDDNQTIKSKLEIFVSGYKM
NPKIAEKYNVSVHFVNKEKPRAYSLVGVPKTGTGYTLSVWMNSVGDGYKCRDAASAQAHLETLSSDVGCEAFSNRKK
MEQKGFTLIEMMIVVAILGIISVIAIPSYQSYIEKGYQSQLYTEMVGINNISKQFILKNPLDDNQTIKSKLEIFVSGYKM
NPKIAEKYNVSVHFVNKEKPRAYSLVGVPKTGTGYTLSVWMNSVGDGYKCRDAASAQAHLETLSSDVGCEAFSNRKK
Nucleotide
Download Length: 474 bp
>NTDB_id=231729 CCD83_RS03200 WP_180299614.1 551224..551697(+) (pilX) [Neisseria meningitidis strain 09-292]
ATGGAACAAAAAGGGTTTACATTGATTGAGATGATGATAGTCGTCGCGATACTCGGCATTATCAGCGTCATTGCCATACC
TTCTTATCAAAGTTATATTGAAAAAGGCTATCAGTCCCAGCTTTATACGGAGATGGTCGGTATCAACAATATTTCCAAAC
AGTTTATTTTGAAAAATCCCCTGGACGATAATCAGACCATCAAGAGCAAACTGGAAATATTTGTCTCAGGCTATAAGATG
AATCCGAAAATTGCCGAAAAATATAATGTTTCGGTGCATTTTGTCAATAAGGAAAAACCAAGGGCATACAGCTTGGTCGG
CGTTCCAAAGACGGGGACGGGTTATACTTTGTCGGTATGGATGAACAGCGTGGGCGACGGATACAAATGCCGTGATGCCG
CTTCTGCCCAAGCCCATTTGGAGACCTTGTCCTCAGATGTCGGCTGTGAAGCCTTCTCTAATCGTAAAAAATAA
ATGGAACAAAAAGGGTTTACATTGATTGAGATGATGATAGTCGTCGCGATACTCGGCATTATCAGCGTCATTGCCATACC
TTCTTATCAAAGTTATATTGAAAAAGGCTATCAGTCCCAGCTTTATACGGAGATGGTCGGTATCAACAATATTTCCAAAC
AGTTTATTTTGAAAAATCCCCTGGACGATAATCAGACCATCAAGAGCAAACTGGAAATATTTGTCTCAGGCTATAAGATG
AATCCGAAAATTGCCGAAAAATATAATGTTTCGGTGCATTTTGTCAATAAGGAAAAACCAAGGGCATACAGCTTGGTCGG
CGTTCCAAAGACGGGGACGGGTTATACTTTGTCGGTATGGATGAACAGCGTGGGCGACGGATACAAATGCCGTGATGCCG
CTTCTGCCCAAGCCCATTTGGAGACCTTGTCCTCAGATGTCGGCTGTGAAGCCTTCTCTAATCGTAAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilX | Neisseria meningitidis 8013 |
98.726 |
100 |
0.987 |
| pilL | Neisseria gonorrhoeae MS11 |
87.261 |
100 |
0.873 |