Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | AB895_RS16155 | Genome accession | NZ_CP021342 |
| Coordinates | 3310876..3311256 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain B8342 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3305876..3316256
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB895_RS16125 (AB895_3264) | kdsB | 3306779..3307540 (+) | 762 | WP_000680696.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| AB895_RS16130 (AB895_3265) | - | 3307552..3308532 (+) | 981 | WP_032058875.1 | DNA polymerase III subunit delta' | - |
| AB895_RS16135 (AB895_3266) | - | 3308544..3308885 (+) | 342 | WP_001183025.1 | PilZ domain-containing protein | - |
| AB895_RS16140 (AB895_3267) | - | 3308903..3309676 (+) | 774 | WP_032058876.1 | TatD family hydrolase | - |
| AB895_RS16145 (AB895_3268) | - | 3309714..3310322 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| AB895_RS16150 (AB895_3269) | - | 3310332..3310886 (+) | 555 | WP_004841361.1 | type II secretion system protein | - |
| AB895_RS16155 (AB895_3270) | xcpV | 3310876..3311256 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| AB895_RS16160 (AB895_3271) | xcpW | 3311256..3311957 (+) | 702 | WP_000594585.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| AB895_RS16165 (AB895_3272) | gspK | 3311957..3312916 (+) | 960 | WP_031997570.1 | type II secretion system minor pseudopilin GspK | - |
| AB895_RS16170 (AB895_3273) | - | 3313146..3313742 (+) | 597 | WP_032058878.1 | 6-carboxytetrahydropterin synthase | - |
| AB895_RS16175 (AB895_3274) | ung | 3313793..3314506 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| AB895_RS16180 (AB895_3275) | - | 3314503..3315627 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| AB895_RS16185 (AB895_3276) | tadA | 3315634..3316137 (+) | 504 | WP_001997771.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=230071 AB895_RS16155 WP_000836911.1 3310876..3311256(+) (xcpV) [Acinetobacter baumannii strain B8342]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=230071 AB895_RS16155 WP_000836911.1 3310876..3311256(+) (xcpV) [Acinetobacter baumannii strain B8342]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAGGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACAATTAGCCCAAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTTTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAGGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACAATTAGCCCAAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTTTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |