Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | CAH07_RS00095 | Genome accession | NZ_CP021123 |
| Coordinates | 17954..18472 (+) | Length | 172 a.a. |
| NCBI ID | WP_003219228.1 | Uniprot ID | A0A063XE16 |
| Organism | Bacillus subtilis strain SEM-9 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 12954..23472
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CAH07_RS00075 (CAH07_00075) | yyzM | 14028..14234 (+) | 207 | WP_003226838.1 | DUF951 family protein | - |
| CAH07_RS00080 (CAH07_00080) | yyaE | 14285..16288 (+) | 2004 | WP_029726086.1 | molybdopterin-dependent oxidoreductase | - |
| CAH07_RS00085 (CAH07_00085) | ychF | 16415..17515 (+) | 1101 | WP_003242727.1 | redox-regulated ATPase YchF | - |
| CAH07_RS00090 (CAH07_00090) | rpsF | 17626..17913 (+) | 288 | WP_003244064.1 | 30S ribosomal protein S6 | - |
| CAH07_RS00095 (CAH07_00095) | ssbA | 17954..18472 (+) | 519 | WP_003219228.1 | single-stranded DNA-binding protein SsbA | Machinery gene |
| CAH07_RS00100 (CAH07_00100) | rpsR | 18516..18755 (+) | 240 | WP_003219224.1 | 30S ribosomal protein S18 | - |
| CAH07_RS00105 (CAH07_00105) | xth | 18819..19577 (+) | 759 | WP_029726087.1 | exodeoxyribonuclease III | - |
| CAH07_RS00110 (CAH07_00110) | ccpB | 19636..20571 (+) | 936 | WP_048654830.1 | transcriptional regulator CcpB | - |
| CAH07_RS00115 (CAH07_00115) | yyaH | 20627..21007 (+) | 381 | WP_048654831.1 | VOC family protein | - |
| CAH07_RS00120 (CAH07_00120) | maa | 21025..21579 (+) | 555 | WP_003226849.1 | sugar O-acetyltransferase | - |
| CAH07_RS00125 (CAH07_00125) | yyaJ | 21613..22968 (-) | 1356 | WP_029318525.1 | MFS transporter | - |
Sequence
Protein
Download Length: 172 a.a. Molecular weight: 18742.31 Da Isoelectric Point: 4.7621
>NTDB_id=228356 CAH07_RS00095 WP_003219228.1 17954..18472(+) (ssbA) [Bacillus subtilis strain SEM-9]
MLNRVVLVGRLTKDPELRYTPNGAAVATFTLAVNRTFTNQSGEREADFINCVTWRRQAENVANFLKKGSLAGVDGRLQTR
NYENQQGQRVFVTEVQAESVQFLEPKNGGGSGSGGYNEGNSGGGQYFGGGQNDNPFGGNQNNQRRNQGNSFNDDPFANDG
KPIDISDDDLPF
MLNRVVLVGRLTKDPELRYTPNGAAVATFTLAVNRTFTNQSGEREADFINCVTWRRQAENVANFLKKGSLAGVDGRLQTR
NYENQQGQRVFVTEVQAESVQFLEPKNGGGSGSGGYNEGNSGGGQYFGGGQNDNPFGGNQNNQRRNQGNSFNDDPFANDG
KPIDISDDDLPF
Nucleotide
Download Length: 519 bp
>NTDB_id=228356 CAH07_RS00095 WP_003219228.1 17954..18472(+) (ssbA) [Bacillus subtilis strain SEM-9]
ATGCTTAACCGAGTTGTATTAGTCGGAAGACTGACAAAAGACCCAGAGCTTCGTTATACGCCAAACGGTGCGGCTGTTGC
TACGTTTACTCTTGCTGTGAATCGTACATTTACGAACCAGTCCGGAGAACGTGAGGCCGATTTCATTAATTGTGTCACTT
GGAGAAGACAAGCCGAAAACGTTGCAAACTTCTTGAAAAAAGGAAGCCTTGCAGGCGTAGATGGCCGTTTACAAACAAGA
AACTATGAAAACCAGCAAGGACAGCGTGTCTTCGTGACAGAGGTCCAAGCTGAAAGTGTTCAATTTCTTGAGCCGAAAAA
CGGCGGCGGTTCTGGTTCAGGTGGATACAACGAAGGAAACAGCGGCGGAGGCCAGTACTTTGGCGGAGGCCAAAATGATA
ATCCATTTGGGGGAAATCAAAACAACCAGAGACGCAATCAGGGGAACAGCTTTAATGATGACCCATTTGCCAACGACGGC
AAACCGATTGACATCTCGGATGATGATCTTCCATTCTAA
ATGCTTAACCGAGTTGTATTAGTCGGAAGACTGACAAAAGACCCAGAGCTTCGTTATACGCCAAACGGTGCGGCTGTTGC
TACGTTTACTCTTGCTGTGAATCGTACATTTACGAACCAGTCCGGAGAACGTGAGGCCGATTTCATTAATTGTGTCACTT
GGAGAAGACAAGCCGAAAACGTTGCAAACTTCTTGAAAAAAGGAAGCCTTGCAGGCGTAGATGGCCGTTTACAAACAAGA
AACTATGAAAACCAGCAAGGACAGCGTGTCTTCGTGACAGAGGTCCAAGCTGAAAGTGTTCAATTTCTTGAGCCGAAAAA
CGGCGGCGGTTCTGGTTCAGGTGGATACAACGAAGGAAACAGCGGCGGAGGCCAGTACTTTGGCGGAGGCCAAAATGATA
ATCCATTTGGGGGAAATCAAAACAACCAGAGACGCAATCAGGGGAACAGCTTTAATGATGACCCATTTGCCAACGACGGC
AAACCGATTGACATCTCGGATGATGATCTTCCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
58.192 |
100 |
0.599 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
64.151 |
61.628 |
0.395 |
| ssb | Glaesserella parasuis strain SC1401 |
35.519 |
100 |
0.378 |