Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | DFI_RS02155 | Genome accession | NZ_CP021081 |
| Coordinates | 439348..439725 (-) | Length | 125 a.a. |
| NCBI ID | WP_027463959.1 | Uniprot ID | A0A221STI5 |
| Organism | Deinococcus ficus strain CC-FR2-10 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 434348..444725
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DFI_RS02140 (DFI_02145) | - | 435009..436121 (+) | 1113 | WP_027463956.1 | methyltransferase domain-containing protein | - |
| DFI_RS02145 (DFI_02150) | - | 436150..437148 (+) | 999 | WP_027463957.1 | Gfo/Idh/MocA family protein | - |
| DFI_RS02150 (DFI_02155) | comEC | 437156..439348 (-) | 2193 | WP_051308188.1 | DNA internalization-related competence protein ComEC/Rec2 | Machinery gene |
| DFI_RS02155 (DFI_02160) | comEA | 439348..439725 (-) | 378 | WP_027463959.1 | ComEA family DNA-binding protein | Machinery gene |
| DFI_RS02160 (DFI_02165) | tuf | 440028..441245 (+) | 1218 | WP_022800164.1 | elongation factor Tu | - |
| DFI_RS02165 (DFI_02170) | rpsJ | 441249..441572 (+) | 324 | WP_022800323.1 | 30S ribosomal protein S10 | - |
| DFI_RS02170 (DFI_02175) | rplC | 441569..442189 (+) | 621 | WP_027463300.1 | 50S ribosomal protein L3 | - |
| DFI_RS02175 (DFI_02180) | rplD | 442193..442810 (+) | 618 | WP_022800321.1 | 50S ribosomal protein L4 | - |
| DFI_RS02180 (DFI_02185) | - | 442807..443094 (+) | 288 | WP_022800320.1 | 50S ribosomal protein L23 | - |
| DFI_RS02185 (DFI_02190) | rplB | 443109..443942 (+) | 834 | WP_022800319.1 | 50S ribosomal protein L2 | - |
| DFI_RS02190 (DFI_02195) | rpsS | 443955..444242 (+) | 288 | WP_022800318.1 | 30S ribosomal protein S19 | - |
| DFI_RS02195 (DFI_02200) | rplV | 444239..444709 (+) | 471 | WP_022800317.1 | 50S ribosomal protein L22 | - |
Sequence
Protein
Download Length: 125 a.a. Molecular weight: 12866.98 Da Isoelectric Point: 10.4172
>NTDB_id=228156 DFI_RS02155 WP_027463959.1 439348..439725(-) (comEA) [Deinococcus ficus strain CC-FR2-10]
MTARPDPWTALLAAGTLLVGGLSLQPTLFAAPHAPAVTRAALTPVQVATDPAPVYPSTASVTPLISGRLNLNTASREQLE
ALPKVGPALAERIIAGRPYRSLADLDRVKGVGPGTLNVLGPLVTF
MTARPDPWTALLAAGTLLVGGLSLQPTLFAAPHAPAVTRAALTPVQVATDPAPVYPSTASVTPLISGRLNLNTASREQLE
ALPKVGPALAERIIAGRPYRSLADLDRVKGVGPGTLNVLGPLVTF
Nucleotide
Download Length: 378 bp
>NTDB_id=228156 DFI_RS02155 WP_027463959.1 439348..439725(-) (comEA) [Deinococcus ficus strain CC-FR2-10]
ATGACCGCCCGGCCCGACCCCTGGACCGCGCTGCTCGCCGCAGGCACCCTGCTGGTCGGCGGACTGAGCCTCCAGCCCAC
GCTGTTCGCCGCCCCGCACGCCCCGGCTGTGACCCGTGCCGCCCTGACTCCAGTCCAGGTGGCTACCGACCCAGCCCCTG
TCTACCCCTCCACCGCCAGCGTCACGCCCCTGATCTCCGGGCGGCTGAACCTGAACACCGCCTCCCGCGAACAGCTCGAG
GCCCTGCCGAAGGTCGGGCCGGCCCTGGCGGAGAGGATCATCGCCGGCCGCCCTTACCGCTCCCTGGCCGACCTGGACCG
CGTGAAGGGCGTGGGCCCGGGCACCCTGAACGTACTCGGGCCGCTGGTCACCTTCTGA
ATGACCGCCCGGCCCGACCCCTGGACCGCGCTGCTCGCCGCAGGCACCCTGCTGGTCGGCGGACTGAGCCTCCAGCCCAC
GCTGTTCGCCGCCCCGCACGCCCCGGCTGTGACCCGTGCCGCCCTGACTCCAGTCCAGGTGGCTACCGACCCAGCCCCTG
TCTACCCCTCCACCGCCAGCGTCACGCCCCTGATCTCCGGGCGGCTGAACCTGAACACCGCCTCCCGCGAACAGCTCGAG
GCCCTGCCGAAGGTCGGGCCGGCCCTGGCGGAGAGGATCATCGCCGGCCGCCCTTACCGCTCCCTGGCCGACCTGGACCG
CGTGAAGGGCGTGGGCCCGGGCACCCTGAACGTACTCGGGCCGCTGGTCACCTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
68.908 |
95.2 |
0.656 |