Detailed information NTG0228029

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: BL14DL4_RS22555
• Genome accession: NZ_CP026673
• Coordinates: 4321932..4323038 (+)
• Length: 368 a.a.
• NCBI ID: WP_009328417.1
• Uniprot ID: -
• Organism: Bacillus licheniformis strain 14ADL4
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 4316932..4328038

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BL14DL4_RS22525 (BL14DL4_04480)	-	4318308..4318730 (+)	423	WP_009328422.1	SMI1/KNR4 family protein	-
BL14DL4_RS22530 (BL14DL4_04481)	-	4318771..4319229 (+)	459	WP_009328421.1	SMI1/KNR4 family protein	-
BL14DL4_RS22540 (BL14DL4_04482)	rok	4319515..4319997 (+)	483	WP_009328420.1	hypothetical protein	Regulator
BL14DL4_RS22545 (BL14DL4_04483)	-	4320067..4320420 (+)	354	WP_009328419.1	hypothetical protein	-
BL14DL4_RS22550 (BL14DL4_04484)	-	4320562..4321821 (+)	1260	WP_009328418.1	MFS transporter	-
BL14DL4_RS22555 (BL14DL4_04485)	rapC	4321932..4323038 (+)	1107	WP_009328417.1	tetratricopeptide repeat protein	Regulator
BL14DL4_RS23435 (BL14DL4_04486)	-	4323035..4323163 (+)	129	WP_021837855.1	hypothetical protein	-
BL14DL4_RS23520	-	4323598..4323681 (-)	84	WP_073411138.1	putative holin-like toxin	-
BL14DL4_RS22565 (BL14DL4_04487)	-	4323884..4324183 (-)	300	WP_034291560.1	hypothetical protein	-
BL14DL4_RS22570 (BL14DL4_04488)	-	4324202..4324456 (-)	255	WP_009328416.1	phage holin	-
BL14DL4_RS22575 (BL14DL4_04489)	-	4324475..4324861 (-)	387	WP_021837858.1	hypothetical protein	-
BL14DL4_RS22580 (BL14DL4_04490)	-	4324993..4326081 (-)	1089	WP_073411136.1	N-acetylmuramoyl-L-alanine amidase	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 43739.88 Da
• Isoelectric Point: 5.0023

>NTDB_id=228029 BL14DL4_RS22555 WP_009328417.1 4321932..4323038(+) (rapC) [Bacillus licheniformis strain 14ADL4]
MTTTEIAYEEVANKINQWYTMIKKREIEDAIKLKDEIDCLLDDMEENQNLLLYYNLLDARHKMSVDMFKSSGEILEKIRK
SPEMQKTDDMLQYYFLFFSGQYMFFKKKYIDAINYYKLAEDKLVKIEDEIEKAEFYYHLAISYYYIDQYFFSLAYAEKAL
TIFREFEDYAHRSISSEMILGANKLDLFHYESAYEHYSHALKFAKAKQIPESEGKAYHNLGILYIRRNMLSEAKDCFKNA
LQLQDYIQSINGLKSIYNLTHVLYKSGQIEEAREWYDKGLKRAEKEGDKEYLAKLTLVNTLYDEYNESVLTNSLDILEKL
DLWNDVAELTLEVGCYYKKSDDIKNAAKYLEKCIHARDQILKVTEELK

Nucleotide

• Length: 1107 bp

>NTDB_id=228029 BL14DL4_RS22555 WP_009328417.1 4321932..4323038(+) (rapC) [Bacillus licheniformis strain 14ADL4]
TTGACAACGACTGAAATTGCATATGAAGAAGTAGCCAATAAGATTAACCAGTGGTATACGATGATTAAAAAGCGTGAAAT
TGAAGATGCCATAAAGTTGAAAGATGAAATTGATTGCTTGTTGGATGATATGGAGGAGAATCAAAATTTGCTCCTTTATT
ACAATCTCTTAGATGCGCGTCACAAGATGTCGGTAGACATGTTTAAGTCGTCAGGGGAAATCCTTGAGAAGATTCGGAAA
AGTCCTGAAATGCAGAAAACGGATGATATGCTCCAATATTATTTTTTGTTTTTCTCTGGTCAATATATGTTTTTCAAAAA
GAAGTACATAGATGCAATTAATTATTACAAATTAGCTGAAGATAAGCTGGTTAAAATTGAAGATGAAATTGAAAAAGCGG
AATTTTATTATCATTTAGCCATATCATATTATTACATTGATCAATATTTCTTCTCATTAGCTTATGCTGAAAAAGCTCTA
ACTATCTTCAGGGAATTTGAAGACTATGCACATAGATCAATTAGCAGTGAAATGATCTTGGGTGCAAATAAACTTGATTT
ATTCCATTATGAATCGGCTTATGAGCATTACAGCCATGCCTTAAAATTTGCAAAGGCTAAGCAGATTCCTGAGTCTGAAG
GAAAGGCATATCATAATCTTGGGATACTCTATATAAGAAGAAACATGCTATCTGAAGCAAAAGACTGTTTTAAAAATGCT
TTGCAGCTTCAAGATTATATCCAAAGCATAAATGGACTTAAATCAATCTATAACCTTACTCATGTCTTGTATAAATCGGG
ACAGATTGAAGAAGCAAGGGAATGGTATGACAAAGGATTGAAACGTGCAGAAAAAGAAGGAGATAAGGAATATTTGGCGA
AACTTACACTTGTTAACACCTTATACGATGAGTACAATGAAAGTGTGTTAACGAATTCCCTTGACATTTTAGAAAAGTTG
GATTTATGGAATGATGTAGCAGAATTGACACTAGAAGTGGGGTGCTACTACAAAAAATCCGATGATATCAAGAATGCAGC
AAAATATCTTGAAAAATGTATTCACGCAAGGGATCAAATTCTAAAAGTGACGGAGGAATTAAAATGA

Domains

Predicted by InterProScan.

• Tetratricopeptide repeat (TPR_8) (333-354)

• MalT-like TPR region (TPR_MalT) (153-285)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-63)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	35.544	100	0.364