Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   BL14DL4_RS08060 Genome accession   NZ_CP026673
Coordinates   1458380..1459261 (-) Length   293 a.a.
NCBI ID   WP_003184856.1    Uniprot ID   -
Organism   Bacillus licheniformis strain 14ADL4     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 1453380..1464261
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BL14DL4_RS08025 (BL14DL4_01603) - 1453589..1454065 (+) 477 WP_003184840.1 Na+/H+ antiporter subunit E -
  BL14DL4_RS08030 (BL14DL4_01604) - 1454065..1454349 (+) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  BL14DL4_RS08035 (BL14DL4_01605) mnhG 1454333..1454707 (+) 375 WP_003184844.1 monovalent cation/H(+) antiporter subunit G -
  BL14DL4_RS08040 (BL14DL4_01606) - 1454747..1455136 (-) 390 WP_009329508.1 hotdog fold thioesterase -
  BL14DL4_RS08045 (BL14DL4_01607) comA 1455153..1455791 (-) 639 WP_003184849.1 response regulator transcription factor Regulator
  BL14DL4_RS08050 (BL14DL4_01608) comP 1455878..1458184 (-) 2307 WP_025807478.1 ATP-binding protein Regulator
  BL14DL4_RS08055 (BL14DL4_01609) comX 1458207..1458371 (-) 165 WP_003184853.1 competence pheromone ComX -
  BL14DL4_RS08060 (BL14DL4_01610) comQ 1458380..1459261 (-) 882 WP_003184856.1 polyprenyl synthetase family protein Regulator
  BL14DL4_RS08065 (BL14DL4_01611) degQ 1459450..1459590 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  BL14DL4_RS08075 (BL14DL4_01613) - 1460076..1460423 (+) 348 WP_009329512.1 hypothetical protein -
  BL14DL4_RS08080 (BL14DL4_01614) - 1460466..1461686 (-) 1221 WP_003184864.1 EAL and HDOD domain-containing protein -
  BL14DL4_RS08085 (BL14DL4_01615) - 1461865..1463334 (-) 1470 WP_003184866.1 nicotinate phosphoribosyltransferase -
  BL14DL4_RS08090 (BL14DL4_01616) - 1463352..1463903 (-) 552 WP_003184868.1 cysteine hydrolase family protein -

Sequence


Protein


Download         Length: 293 a.a.        Molecular weight: 33459.20 Da        Isoelectric Point: 4.6798

>NTDB_id=227933 BL14DL4_RS08060 WP_003184856.1 1458380..1459261(-) (comQ) [Bacillus licheniformis strain 14ADL4]
MNHFIDLEIPNADLNRTLHAFLDAKDQLHFSELAFYHYQSFGGTDTDAAETLGAGIELLILAFDIFDDLEDEDSPDEPWM
KINRSVAMNAATALYTISIKVIGSVSNDSCFFNKMMEYILQSSQGQHDDLSDKPVTENECLDMIKRKSGSLTALSCVLGT
MLATGKFNPTVESYALQLGIALQIENDYRGLFYNSKSDIVKNKRTLAYLYLKRKFNQSSIDLLKVFENEDKIADIEIKCY
KEKLKEAGVPQYMYVMIQLAIQKFRRGIAELELKQEEKKWLASFLLNKFDKED

Nucleotide


Download         Length: 882 bp        

>NTDB_id=227933 BL14DL4_RS08060 WP_003184856.1 1458380..1459261(-) (comQ) [Bacillus licheniformis strain 14ADL4]
ATGAATCATTTTATAGACCTTGAGATTCCCAATGCGGACTTAAATCGGACGCTGCACGCTTTTCTAGATGCAAAGGACCA
GTTGCATTTCAGCGAGCTTGCTTTTTATCATTACCAAAGTTTCGGCGGCACGGACACCGATGCGGCAGAAACCCTTGGAG
CAGGCATTGAACTCTTGATTCTTGCGTTTGATATATTCGATGATTTAGAGGATGAAGACAGCCCCGATGAACCTTGGATG
AAAATCAACCGTTCAGTCGCAATGAATGCGGCGACTGCGCTTTATACAATAAGCATTAAAGTGATCGGTTCGGTGTCGAA
CGATTCTTGCTTTTTTAATAAAATGATGGAATACATATTGCAATCTTCACAAGGGCAACATGATGATCTTAGTGATAAGC
CGGTTACGGAAAACGAATGCCTTGATATGATCAAGCGCAAATCTGGTTCATTGACAGCTCTTTCATGTGTTTTGGGAACC
ATGCTCGCTACAGGTAAATTTAATCCTACTGTTGAATCTTATGCACTCCAATTGGGCATTGCTTTACAGATCGAAAATGA
TTATAGAGGTCTTTTCTATAATTCAAAAAGCGATATTGTGAAAAATAAGCGAACACTTGCTTATTTATACTTGAAAAGAA
AATTTAATCAATCCTCAATTGATTTATTAAAAGTATTTGAAAATGAGGATAAAATTGCCGATATAGAAATAAAATGTTAT
AAAGAAAAATTGAAGGAAGCTGGTGTTCCCCAATATATGTATGTCATGATTCAGCTTGCTATTCAGAAATTTAGAAGAGG
AATAGCTGAGTTAGAGCTGAAACAAGAGGAAAAGAAATGGCTTGCTTCTTTCCTTTTGAACAAGTTTGATAAGGAGGATT
AA

Domains


Predicted by InterProScan.

(41-230)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

44.637

98.635

0.44