Detailed information NTG0224815

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: B7L46_RS17475
• Genome accession: NZ_CP020597
• Coordinates: 3443276..3443977 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594572.1
• Uniprot ID: A0A009IN88
• Organism: Acinetobacter baumannii strain HWBA8
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3438276..3448977

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
B7L46_RS17440 (B7L46_17440)	kdsB	3438799..3439560 (+)	762	WP_000680701.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
B7L46_RS17445 (B7L46_17445)	-	3439572..3440552 (+)	981	WP_001075418.1	DNA polymerase III subunit delta'	-
B7L46_RS17450 (B7L46_17450)	-	3440564..3440905 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
B7L46_RS17455 (B7L46_17455)	-	3440923..3441696 (+)	774	WP_000497298.1	TatD family hydrolase	-
B7L46_RS17460 (B7L46_17460)	-	3441734..3442342 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
B7L46_RS17465 (B7L46_17465)	-	3442352..3442906 (+)	555	WP_000841379.1	type II secretion system protein	-
B7L46_RS17470 (B7L46_17470)	xcpV	3442896..3443276 (+)	381	WP_000836910.1	type II secretion system minor pseudopilin GspI	Machinery gene
B7L46_RS17475 (B7L46_17475)	xcpW	3443276..3443977 (+)	702	WP_000594572.1	type II secretion system minor pseudopilin GspJ	Machinery gene
B7L46_RS17480 (B7L46_17480)	gspK	3443977..3444936 (+)	960	WP_000301481.1	type II secretion system minor pseudopilin GspK	-
B7L46_RS17485 (B7L46_17485)	-	3445166..3445762 (+)	597	WP_000908451.1	6-pyruvoyl trahydropterin synthase family protein	-
B7L46_RS17490 (B7L46_17490)	ung	3445813..3446526 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
B7L46_RS17495 (B7L46_17495)	-	3446523..3447647 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
B7L46_RS17500 (B7L46_17500)	tadA	3447654..3448157 (+)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
B7L46_RS17505 (B7L46_17505)	-	3448227..3448670 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26613.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=224815 B7L46_RS17475 WP_000594572.1 3443276..3443977(+) (xcpW) [Acinetobacter baumannii strain HWBA8]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=224815 B7L46_RS17475 WP_000594572.1 3443276..3443977(+) (xcpW) [Acinetobacter baumannii strain HWBA8]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCCAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATAGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A009IN88

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991