Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | B5S57_RS17700 | Genome accession | NZ_CP020534 |
| Coordinates | 2624835..2625452 (+) | Length | 205 a.a. |
| NCBI ID | WP_013857672.1 | Uniprot ID | Q8VQC6 |
| Organism | Vibrio anguillarum strain 425 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2619835..2630452
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B5S57_RS17680 (B5S57_17535) | - | 2620200..2621120 (-) | 921 | WP_026027559.1 | ABC transporter ATP-binding protein | - |
| B5S57_RS17685 (B5S57_17540) | - | 2621262..2622929 (-) | 1668 | WP_038148651.1 | SulP family inorganic anion transporter | - |
| B5S57_RS17690 (B5S57_17545) | can | 2623180..2623848 (+) | 669 | WP_013857670.1 | carbonate dehydratase | - |
| B5S57_RS17695 (B5S57_17550) | hpt | 2623933..2624463 (-) | 531 | WP_010319544.1 | hypoxanthine phosphoribosyltransferase | - |
| B5S57_RS17700 (B5S57_17555) | opaR | 2624835..2625452 (+) | 618 | WP_013857672.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| B5S57_RS17705 (B5S57_17560) | lpdA | 2625570..2626997 (-) | 1428 | WP_013857673.1 | dihydrolipoyl dehydrogenase | - |
| B5S57_RS17710 (B5S57_17565) | aceF | 2627298..2629181 (-) | 1884 | WP_013857674.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
Sequence
Protein
Download Length: 205 a.a. Molecular weight: 23700.30 Da Isoelectric Point: 6.3812
>NTDB_id=223962 B5S57_RS17700 WP_013857672.1 2624835..2625452(+) (opaR) [Vibrio anguillarum strain 425]
METSIEKRPRTRLSPQKRKLQLMEIALEVFATRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLTHVVRQFSNFL
ADNIDLDLHAKDNLTNITTKMISLVIEDCHWLKVWFEWSASTREEVWPLFVSTNRTNQLLVQNMFIKAIERGEVCDRHEP
EHLATLFLGIFYSLFVQANRIQDEASMGVLVKSYLSMLCIYKKDH
METSIEKRPRTRLSPQKRKLQLMEIALEVFATRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLTHVVRQFSNFL
ADNIDLDLHAKDNLTNITTKMISLVIEDCHWLKVWFEWSASTREEVWPLFVSTNRTNQLLVQNMFIKAIERGEVCDRHEP
EHLATLFLGIFYSLFVQANRIQDEASMGVLVKSYLSMLCIYKKDH
Nucleotide
Download Length: 618 bp
>NTDB_id=223962 B5S57_RS17700 WP_013857672.1 2624835..2625452(+) (opaR) [Vibrio anguillarum strain 425]
ATGGAAACATCGATAGAAAAACGCCCCAGAACTCGCTTATCACCACAAAAACGCAAACTTCAACTGATGGAAATCGCTCT
TGAAGTGTTTGCTACACGGGGAATAGGCCGAGGTGGCCACGCAGATATTGCTGAAATCGCCCAAGTTTCAGTCGCGACTG
TCTTTAACTACTTTCCAACCCGAGAAGATTTAGTCGACGACGTACTCACTCATGTTGTACGTCAGTTTTCAAACTTCCTC
GCAGATAATATTGATCTTGATTTGCATGCGAAAGATAACTTAACCAACATCACCACTAAGATGATTTCTCTTGTGATTGA
AGATTGTCACTGGTTAAAAGTATGGTTTGAATGGAGCGCTTCAACGCGCGAAGAAGTGTGGCCACTTTTTGTCTCCACCA
ACCGTACTAATCAACTTTTGGTACAAAATATGTTTATCAAAGCCATTGAACGTGGCGAAGTGTGCGATCGGCATGAGCCA
GAACATCTTGCTACGCTCTTTCTTGGTATCTTCTACTCACTGTTTGTACAAGCAAATCGTATACAAGACGAAGCCAGCAT
GGGTGTACTAGTGAAAAGCTACCTCAGCATGCTCTGCATCTATAAAAAAGATCACTAG
ATGGAAACATCGATAGAAAAACGCCCCAGAACTCGCTTATCACCACAAAAACGCAAACTTCAACTGATGGAAATCGCTCT
TGAAGTGTTTGCTACACGGGGAATAGGCCGAGGTGGCCACGCAGATATTGCTGAAATCGCCCAAGTTTCAGTCGCGACTG
TCTTTAACTACTTTCCAACCCGAGAAGATTTAGTCGACGACGTACTCACTCATGTTGTACGTCAGTTTTCAAACTTCCTC
GCAGATAATATTGATCTTGATTTGCATGCGAAAGATAACTTAACCAACATCACCACTAAGATGATTTCTCTTGTGATTGA
AGATTGTCACTGGTTAAAAGTATGGTTTGAATGGAGCGCTTCAACGCGCGAAGAAGTGTGGCCACTTTTTGTCTCCACCA
ACCGTACTAATCAACTTTTGGTACAAAATATGTTTATCAAAGCCATTGAACGTGGCGAAGTGTGCGATCGGCATGAGCCA
GAACATCTTGCTACGCTCTTTCTTGGTATCTTCTACTCACTGTTTGTACAAGCAAATCGTATACAAGACGAAGCCAGCAT
GGGTGTACTAGTGAAAAGCTACCTCAGCATGCTCTGCATCTATAAAAAAGATCACTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
81.683 |
98.537 |
0.805 |
| hapR | Vibrio cholerae C6706 |
74.257 |
98.537 |
0.732 |
| hapR | Vibrio cholerae strain A1552 |
74.257 |
98.537 |
0.732 |