Detailed information
Bioinformatically predicted
Overview
| Name | abrB | Type | Regulator |
| Locus tag | BS21228_RS12480 | Genome accession | NZ_CP020023 |
| Coordinates | 2323797..2324087 (-) | Length | 96 a.a. |
| NCBI ID | WP_003226760.1 | Uniprot ID | A0A7G9PCZ4 |
| Organism | Bacillus subtilis strain ATCC 21228 | ||
| Function | repression of comK; repression of rok (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2318797..2329087
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BS21228_RS12440 (BS21228_12395) | darA | 2318820..2319149 (+) | 330 | WP_003242755.1 | cyclic di-AMP receptor DarA | - |
| BS21228_RS12445 (BS21228_12400) | yaaR | 2319162..2319602 (+) | 441 | WP_009966249.1 | YaaR family protein | - |
| BS21228_RS12450 (BS21228_12405) | holB | 2319614..2320603 (+) | 990 | WP_003226770.1 | DNA polymerase III subunit delta' | - |
| BS21228_RS12455 (BS21228_12410) | ricT | 2320606..2321433 (+) | 828 | WP_003226767.1 | competence/sporulation regulator complex protein RicT | - |
| BS21228_RS12460 (BS21228_12415) | yabA | 2321448..2321807 (+) | 360 | WP_003218308.1 | replication initiation-control protein YabA | - |
| BS21228_RS12465 (BS21228_12420) | trmNF | 2321866..2322609 (+) | 744 | WP_003244526.1 | tRNA1(Val) (adenine(37)-N6)-methyltransferase | - |
| BS21228_RS12470 (BS21228_12425) | yazA | 2322596..2322895 (+) | 300 | WP_003242983.1 | GIY-YIG nuclease family protein | - |
| BS21228_RS12475 (BS21228_12430) | rsmI | 2322870..2323748 (+) | 879 | WP_003243457.1 | 16S rRNA (cytidine(1402)-2'-O)-methyltransferase | - |
| BS21228_RS12480 (BS21228_12435) | abrB | 2323797..2324087 (-) | 291 | WP_003226760.1 | transition state genes transcriptional regulator AbrB | Regulator |
| BS21228_RS12485 (BS21228_12440) | metG | 2324582..2326576 (+) | 1995 | WP_014478594.1 | methionine--tRNA ligase | - |
| BS21228_RS12490 (BS21228_12445) | dayD | 2326656..2327423 (+) | 768 | WP_014478595.1 | TatD family hydrolase | - |
| BS21228_RS12495 (BS21228_12450) | yabE | 2327579..2328892 (+) | 1314 | WP_003226754.1 | ubiquitin-like domain-containing protein | - |
Sequence
Protein
Download Length: 96 a.a. Molecular weight: 10772.62 Da Isoelectric Point: 6.3482
>NTDB_id=220344 BS21228_RS12480 WP_003226760.1 2323797..2324087(-) (abrB) [Bacillus subtilis strain ATCC 21228]
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
MFMKSTGIVRKVDELGRVVIPIELRRTLGIAEKDALEIYVDDEKIILKKYKPNMTCQVTGEVSDDNLKLAGGKLVLSKEG
AEQIISEIQNQLQNLK
Nucleotide
Download Length: 291 bp
>NTDB_id=220344 BS21228_RS12480 WP_003226760.1 2323797..2324087(-) (abrB) [Bacillus subtilis strain ATCC 21228]
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
ATGTTTATGAAATCTACTGGTATTGTACGTAAAGTTGATGAATTAGGACGTGTAGTTATTCCTATCGAACTGCGTCGTAC
TCTTGGAATCGCAGAAAAAGATGCTCTTGAAATCTATGTTGATGATGAAAAAATCATCCTTAAAAAATATAAACCAAACA
TGACTTGCCAAGTAACTGGTGAAGTTTCTGATGATAACCTTAAACTTGCAGGCGGTAAATTGGTTCTTAGTAAAGAAGGC
GCTGAGCAAATCATCAGCGAAATCCAAAACCAGCTTCAAAACCTTAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| abrB | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |