Detailed information NTG0218988

Bioinformatically predicted

Overview

• Name: comEC/celB
• Type: Machinery gene
• Locus tag: SPSF3K_RS08670
• Genome accession: NZ_CP025420
• Coordinates: 1714730..1716964 (-)
• Length: 744 a.a.
• NCBI ID: WP_308686828.1
• Uniprot ID: -
• Organism: Streptococcus parauberis strain SPOF3K
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1709730..1721964

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPSF3K_RS08650 (SPSF3K_01754)	queA	1710605..1711633 (+)	1029	WP_003108200.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
SPSF3K_RS08655 (SPSF3K_01755)	-	1711682..1712800 (-)	1119	WP_003108199.1	serine hydrolase	-
SPSF3K_RS08660 (SPSF3K_01756)	sodA	1712937..1713545 (-)	609	WP_003102930.1	superoxide dismutase SodA	-
SPSF3K_RS08665 (SPSF3K_01757)	holA	1713655..1714683 (-)	1029	WP_003104123.1	DNA polymerase III subunit delta	-
SPSF3K_RS08670 (SPSF3K_01758)	comEC/celB	1714730..1716964 (-)	2235	WP_308686828.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
SPSF3K_RS08675 (SPSF3K_01759)	comEA	1716957..1717634 (-)	678	WP_003108197.1	helix-hairpin-helix domain-containing protein	Machinery gene
SPSF3K_RS08680 (SPSF3K_01760)	-	1717694..1718434 (-)	741	WP_003107274.1	lysophospholipid acyltransferase family protein	-
SPSF3K_RS08685 (SPSF3K_01761)	-	1718574..1719344 (+)	771	WP_003108196.1	tRNA1(Val) (adenine(37)-N6)-methyltransferase	-
SPSF3K_RS08690 (SPSF3K_01762)	-	1719334..1719618 (+)	285	WP_003108195.1	GIY-YIG nuclease family protein	-
SPSF3K_RS08695 (SPSF3K_01763)	-	1719632..1721629 (-)	1998	WP_003108194.1	KUP/HAK/KT family potassium transporter	-

Sequence

Protein

• Length: 744 a.a.
• Molecular weight: 86228.31 Da
• Isoelectric Point: 9.8095

>NTDB_id=218988 SPSF3K_RS08670 WP_308686828.1 1714730..1716964(-) (comEC/celB) [Streptococcus parauberis strain SPOF3K]
MNKYLPIPVAQLALITIMMFYSINCRSHLAVLLFICLLILLINNYGKIVFVKVCLVLTFFAFYFLVNSHISAYKFKHQPK
VIYHIRLIPDSININGDLLSFEGEENENRYQIFYQLKTKEEFLFYRNCSDYLDIETEIKLEHADGQRNFNGFNYQKHLKN
HGIFRIGRLKDIKKMRISKVRNLFEYLVKWRRLAIVTCQQTYPDPMAHYMTGLLFGFLDKSFGQMTDIYSQLGIIHLFAL
SGMHVGFFFNNFRKVLIKISIPQEYFPGIELLFSIFYAAITGYSISVLRSLSQRNLSNLKVSKEDNIAFTVFILFVFSPN
FLLTVGGVLSLAYAFVISILNNRYHHHKCRQFIFPLSIACAGLPFLTFYFSVYHPISILLTALFSLLFDQLILPLLTVVY
FLTPILPLRTLNGIFESMEVVVRWLCEKFCHAWIIGKPNQIQLFLILALLVILYDFWNRKNVRYLLIFLLSLVWFSIAQP
FKNEITIVDVGQGDSILIRDNFNKTILIDVGGVHKQQGKMEWQRRHNLTNAEKTLIPYLKSQGINKIDQLLLTHTDTDHV
GDMEDVVKSINIKEILVSQGSLTNQEFVDRLYKMKRKVKVIKRGDVLPVMGSQLRVLYPFKKGDGKNNDSIVLYGKLLNK
RFLFTGDLEADGEKEILGNYPDLKADILKAGHHGSKGSSIEEFIDQLSPQIALFSAGKNNIYKHPHQETISRFHRRKINT
LRTDQNGAIRFKGLFKWTIECVNP

Nucleotide

• Length: 2235 bp

>NTDB_id=218988 SPSF3K_RS08670 WP_308686828.1 1714730..1716964(-) (comEC/celB) [Streptococcus parauberis strain SPOF3K]
TTGAATAAATACTTACCGATTCCAGTTGCTCAGTTAGCTTTGATAACAATAATGATGTTTTACTCAATTAATTGTAGAAG
TCATTTAGCAGTACTGCTTTTTATTTGTCTTTTAATATTACTAATCAACAATTATGGGAAAATAGTTTTTGTTAAAGTTT
GTTTAGTTCTTACATTTTTTGCTTTCTACTTTCTTGTCAATTCTCACATTTCCGCCTACAAATTTAAGCATCAACCCAAA
GTTATTTACCATATTCGGTTAATTCCTGATTCAATTAATATTAATGGAGACCTTTTATCTTTTGAAGGTGAAGAAAATGA
AAATCGATATCAAATCTTTTATCAGCTGAAAACGAAAGAGGAATTCTTATTTTATCGCAATTGCAGTGATTATCTTGATA
TTGAAACGGAAATAAAATTAGAGCATGCTGATGGACAAAGAAATTTCAATGGATTTAACTATCAGAAGCACTTAAAAAAT
CATGGAATTTTTCGAATTGGTCGACTTAAAGATATTAAGAAAATGCGTATTTCAAAGGTCCGAAATCTATTTGAATACTT
GGTGAAATGGCGAAGACTGGCTATTGTTACCTGTCAGCAGACTTATCCGGATCCAATGGCTCATTATATGACTGGCTTGC
TATTCGGATTTTTAGATAAAAGTTTTGGACAGATGACAGATATATATAGTCAGCTAGGAATTATTCATCTCTTTGCCTTG
TCAGGGATGCATGTTGGATTTTTCTTTAATAATTTTCGAAAAGTCTTAATCAAGATATCAATTCCACAAGAGTACTTCCC
CGGAATTGAATTGCTCTTTTCAATTTTTTATGCTGCAATAACTGGCTATAGTATTTCTGTTTTAAGGAGTTTATCTCAAA
GGAATCTAAGTAACTTAAAGGTTAGTAAGGAAGATAATATTGCATTTACAGTTTTTATACTTTTTGTCTTTTCTCCTAAT
TTTCTCTTAACTGTAGGAGGGGTACTGTCCTTAGCTTATGCATTTGTTATATCGATTTTGAACAATCGATATCATCATCA
CAAGTGTCGACAATTTATTTTCCCTCTTTCAATTGCATGTGCCGGTTTGCCATTCTTGACTTTTTACTTTTCGGTTTACC
ATCCAATATCTATTCTCTTAACCGCATTATTTTCCTTGCTATTTGATCAGCTCATTTTGCCGCTTTTAACAGTTGTTTAT
TTTTTGACTCCTATTTTACCTTTACGTACCTTGAACGGCATTTTTGAATCGATGGAAGTGGTTGTTCGCTGGTTATGTGA
AAAATTTTGTCATGCATGGATTATTGGAAAACCAAATCAAATTCAACTTTTCCTAATTTTGGCTTTGCTAGTTATTTTAT
ATGATTTTTGGAATAGGAAAAATGTGAGGTATCTCCTTATTTTTCTTCTTAGTCTTGTTTGGTTTTCAATTGCTCAGCCA
TTCAAAAATGAAATTACAATTGTTGATGTCGGACAAGGGGATAGTATATTGATTAGGGATAACTTTAACAAAACTATCTT
AATTGACGTTGGAGGAGTCCATAAACAACAAGGAAAAATGGAATGGCAAAGAAGACATAATCTTACTAATGCGGAGAAAA
CATTAATTCCATATTTGAAAAGTCAGGGTATTAACAAGATCGATCAACTATTACTAACGCATACGGATACAGACCATGTT
GGTGATATGGAGGATGTTGTGAAATCAATTAATATTAAGGAAATATTGGTTAGTCAAGGTAGTTTAACGAATCAAGAGTT
TGTAGACAGGCTATATAAGATGAAAAGAAAAGTGAAAGTGATTAAAAGAGGAGATGTTTTACCTGTTATGGGGAGTCAGC
TTAGGGTTCTCTATCCTTTTAAAAAAGGGGATGGGAAAAATAATGATTCCATCGTATTGTATGGAAAATTGTTGAATAAG
CGATTTTTATTTACTGGAGATTTAGAAGCTGATGGGGAAAAAGAAATATTGGGAAATTATCCCGATTTGAAAGCTGATAT
TTTGAAAGCTGGTCATCATGGGTCGAAGGGATCGTCTATTGAAGAATTCATTGATCAACTTTCACCACAAATAGCTTTAT
TTTCAGCTGGGAAAAACAATATTTATAAGCATCCACATCAAGAAACTATAAGTCGTTTTCATCGACGGAAAATTAATACA
TTACGGACTGACCAAAATGGAGCAATTCGATTTAAAGGTTTATTTAAGTGGACAATCGAATGCGTTAATCCTTAA

Domains

Predicted by InterProScan.

• Competence protein (Competence) (213-459)

• Metallo-beta-lactamase superfamily (Lactamase_B) (489-695)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/celB	Streptococcus mitis SK321	44.504	100	0.446
comEC/celB	Streptococcus mitis NCTC 12261	44.236	100	0.444
comEC/celB	Streptococcus pneumoniae TIGR4	44.011	99.866	0.44
comEC/celB	Streptococcus pneumoniae Rx1	43.338	99.866	0.433
comEC/celB	Streptococcus pneumoniae D39	43.338	99.866	0.433
comEC/celB	Streptococcus pneumoniae R6	43.338	99.866	0.433
comEC	Lactococcus lactis subsp. cremoris KW2	43.108	99.462	0.429