Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | PCC7120DELTA_RS14030 | Genome accession | NC_003272 |
| Coordinates | 2936180..2937298 (-) | Length | 372 a.a. |
| NCBI ID | WP_010996599.1 | Uniprot ID | Q8YUA9 |
| Organism | Nostoc sp. PCC 7120 = FACHB-418 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2931180..2942298
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PCC7120DELTA_RS14005 (all2438) | - | 2931349..2931945 (-) | 597 | WP_010996594.1 | Uma2 family endonuclease | - |
| PCC7120DELTA_RS14010 (all2439) | - | 2932097..2932576 (-) | 480 | WP_126987027.1 | hypothetical protein | - |
| PCC7120DELTA_RS14015 (alr2440) | bioU | 2932939..2933943 (+) | 1005 | WP_010996596.1 | (S)-8-amino-7-oxononanoate synthase BioU | - |
| PCC7120DELTA_RS14020 (all2441) | - | 2934011..2934565 (-) | 555 | WP_010996597.1 | hypothetical protein | - |
| PCC7120DELTA_RS14025 (all2442) | - | 2934849..2936072 (-) | 1224 | WP_010996598.1 | type II secretion system F family protein | - |
| PCC7120DELTA_RS14030 (all2443) | pilT | 2936180..2937298 (-) | 1119 | WP_010996599.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| PCC7120DELTA_RS14035 (all2444) | pilB/pilB1 | 2937346..2939358 (-) | 2013 | WP_010996600.1 | GspE/PulE family protein | Machinery gene |
| PCC7120DELTA_RS14040 (alr2445) | grpE | 2939744..2940490 (+) | 747 | WP_010996601.1 | nucleotide exchange factor GrpE | - |
Sequence
Protein
Download Length: 372 a.a. Molecular weight: 40822.21 Da Isoelectric Point: 7.0974
>NTDB_id=21840 PCC7120DELTA_RS14030 WP_010996599.1 2936180..2937298(-) (pilT) [Nostoc sp. PCC 7120 = FACHB-418]
MEMMIEDLMEQMIEMGGSDMHLSAGLPPYFRISGKLTPIGEEVLTADQCQRLIFSMLNNTQRKTLEQTWELDCSYGVKGL
ARFRVNVYKERGAYAACLRALSSKIPNFEKLGLPDVVREMCDKPRGLILVTGPTGSGKTTTLAAMIDLINRTKAEHILTV
EDPIEFVYEPIKSLVHQRQLGEDTKSFANALKAALREDPDIVLVGEMRDLETISLAISAAETGHLVFGTLHTSSASQTVD
RIIDVFPHEKQTQVRVQLSNSLVAVFSQTLVPKKNPKPGEYGRVMAQEIMIITPAISNLIREGKTSQIYSAIQTGGKLGM
QTLEKVLADYYKSGTISFEAAMSKTSKPDEIQRLIGPSAPPPGAKAGAVKAH
MEMMIEDLMEQMIEMGGSDMHLSAGLPPYFRISGKLTPIGEEVLTADQCQRLIFSMLNNTQRKTLEQTWELDCSYGVKGL
ARFRVNVYKERGAYAACLRALSSKIPNFEKLGLPDVVREMCDKPRGLILVTGPTGSGKTTTLAAMIDLINRTKAEHILTV
EDPIEFVYEPIKSLVHQRQLGEDTKSFANALKAALREDPDIVLVGEMRDLETISLAISAAETGHLVFGTLHTSSASQTVD
RIIDVFPHEKQTQVRVQLSNSLVAVFSQTLVPKKNPKPGEYGRVMAQEIMIITPAISNLIREGKTSQIYSAIQTGGKLGM
QTLEKVLADYYKSGTISFEAAMSKTSKPDEIQRLIGPSAPPPGAKAGAVKAH
Nucleotide
Download Length: 1119 bp
>NTDB_id=21840 PCC7120DELTA_RS14030 WP_010996599.1 2936180..2937298(-) (pilT) [Nostoc sp. PCC 7120 = FACHB-418]
ATGGAAATGATGATTGAAGACTTGATGGAGCAGATGATTGAAATGGGTGGTTCGGATATGCACTTATCCGCAGGGTTGCC
CCCCTATTTCCGTATCAGTGGCAAACTCACACCCATAGGCGAAGAAGTACTGACCGCCGACCAGTGCCAAAGACTGATTT
TTAGTATGCTCAATAACACCCAACGTAAAACCTTAGAGCAGACTTGGGAGTTAGATTGTTCCTATGGTGTCAAAGGTTTG
GCTCGCTTCCGGGTCAATGTTTATAAAGAGCGTGGTGCTTATGCTGCTTGTTTAAGAGCGCTCAGTTCCAAAATTCCTAA
TTTTGAAAAGTTGGGTTTACCGGATGTTGTACGGGAAATGTGCGACAAACCTAGAGGGTTGATTCTCGTCACAGGGCCGA
CAGGTTCCGGTAAAACAACCACTCTGGCGGCAATGATTGACTTAATTAACCGCACGAAGGCAGAGCATATCCTGACAGTA
GAAGACCCCATTGAATTTGTATACGAACCAATTAAAAGCTTAGTTCACCAACGACAATTAGGTGAAGATACAAAAAGCTT
TGCTAACGCTTTAAAAGCAGCTTTGCGGGAAGATCCAGATATTGTTTTGGTTGGGGAAATGCGGGATTTGGAGACGATTT
CTTTGGCGATTTCTGCCGCAGAAACCGGACACTTAGTATTTGGTACGCTGCACACTAGTTCTGCTTCTCAGACTGTTGAC
CGGATTATCGACGTTTTTCCCCACGAAAAACAAACTCAAGTACGGGTACAGTTATCTAACTCTTTAGTAGCTGTATTTAG
CCAAACATTAGTGCCGAAGAAAAATCCCAAGCCCGGTGAATACGGCCGTGTCATGGCACAAGAAATTATGATTATTACTC
CTGCTATTTCTAACTTAATTCGTGAAGGTAAAACCTCACAAATTTATTCCGCCATTCAGACTGGCGGTAAGTTAGGAATG
CAAACATTAGAAAAGGTTTTAGCTGATTATTACAAATCAGGCACAATTTCTTTTGAAGCAGCAATGTCTAAAACATCTAA
GCCAGATGAAATTCAACGCCTCATCGGTCCTTCTGCCCCACCACCAGGGGCTAAAGCCGGAGCCGTCAAAGCACATTAA
ATGGAAATGATGATTGAAGACTTGATGGAGCAGATGATTGAAATGGGTGGTTCGGATATGCACTTATCCGCAGGGTTGCC
CCCCTATTTCCGTATCAGTGGCAAACTCACACCCATAGGCGAAGAAGTACTGACCGCCGACCAGTGCCAAAGACTGATTT
TTAGTATGCTCAATAACACCCAACGTAAAACCTTAGAGCAGACTTGGGAGTTAGATTGTTCCTATGGTGTCAAAGGTTTG
GCTCGCTTCCGGGTCAATGTTTATAAAGAGCGTGGTGCTTATGCTGCTTGTTTAAGAGCGCTCAGTTCCAAAATTCCTAA
TTTTGAAAAGTTGGGTTTACCGGATGTTGTACGGGAAATGTGCGACAAACCTAGAGGGTTGATTCTCGTCACAGGGCCGA
CAGGTTCCGGTAAAACAACCACTCTGGCGGCAATGATTGACTTAATTAACCGCACGAAGGCAGAGCATATCCTGACAGTA
GAAGACCCCATTGAATTTGTATACGAACCAATTAAAAGCTTAGTTCACCAACGACAATTAGGTGAAGATACAAAAAGCTT
TGCTAACGCTTTAAAAGCAGCTTTGCGGGAAGATCCAGATATTGTTTTGGTTGGGGAAATGCGGGATTTGGAGACGATTT
CTTTGGCGATTTCTGCCGCAGAAACCGGACACTTAGTATTTGGTACGCTGCACACTAGTTCTGCTTCTCAGACTGTTGAC
CGGATTATCGACGTTTTTCCCCACGAAAAACAAACTCAAGTACGGGTACAGTTATCTAACTCTTTAGTAGCTGTATTTAG
CCAAACATTAGTGCCGAAGAAAAATCCCAAGCCCGGTGAATACGGCCGTGTCATGGCACAAGAAATTATGATTATTACTC
CTGCTATTTCTAACTTAATTCGTGAAGGTAAAACCTCACAAATTTATTCCGCCATTCAGACTGGCGGTAAGTTAGGAATG
CAAACATTAGAAAAGGTTTTAGCTGATTATTACAAATCAGGCACAATTTCTTTTGAAGCAGCAATGTCTAAAACATCTAA
GCCAGATGAAATTCAACGCCTCATCGGTCCTTCTGCCCCACCACCAGGGGCTAAAGCCGGAGCCGTCAAAGCACATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilT | Pseudomonas aeruginosa PAK |
54.441 |
93.817 |
0.511 |
| pilT | Pseudomonas stutzeri DSM 10701 |
53.868 |
93.817 |
0.505 |
| pilT | Legionella pneumophila strain ERS1305867 |
52.738 |
93.28 |
0.492 |
| pilT | Acinetobacter baylyi ADP1 |
52.738 |
93.28 |
0.492 |
| pilT | Legionella pneumophila strain Lp02 |
52.738 |
93.28 |
0.492 |
| pilT | Acinetobacter nosocomialis M2 |
51.873 |
93.28 |
0.484 |
| pilT | Acinetobacter baumannii D1279779 |
51.873 |
93.28 |
0.484 |
| pilT | Acinetobacter baumannii strain A118 |
51.873 |
93.28 |
0.484 |
| pilT | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
47.425 |
99.194 |
0.47 |
| pilT | Neisseria gonorrhoeae MS11 |
48.138 |
93.817 |
0.452 |
| pilT | Vibrio cholerae O1 biovar El Tor strain E7946 |
49.123 |
91.935 |
0.452 |
| pilT | Vibrio cholerae strain A1552 |
49.123 |
91.935 |
0.452 |
| pilT | Neisseria meningitidis 8013 |
47.851 |
93.817 |
0.449 |