Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   CVO91_RS04375 Genome accession   NZ_CP024974
Coordinates   835163..835645 (-) Length   160 a.a.
NCBI ID   WP_002941426.1    Uniprot ID   -
Organism   Streptococcus suis strain CZ130302     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 830163..840645
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CVO91_RS04350 (CVO91_04350) - 831516..831770 (+) 255 WP_002939757.1 DUF2087 domain-containing protein -
  CVO91_RS04355 (CVO91_04355) - 831807..833063 (-) 1257 WP_100664769.1 ISL3 family transposase -
  CVO91_RS04360 (CVO91_04360) - 833213..833515 (-) 303 WP_100664770.1 hypothetical protein -
  CVO91_RS04365 (CVO91_04365) - 833708..834451 (+) 744 WP_100664771.1 polyphosphate polymerase domain-containing protein -
  CVO91_RS04370 (CVO91_04370) - 834438..835115 (+) 678 WP_002941428.1 DUF4956 domain-containing protein -
  CVO91_RS04375 (CVO91_04375) mutX 835163..835645 (-) 483 WP_002941426.1 8-oxo-dGTP diphosphatase Machinery gene
  CVO91_RS04380 (CVO91_04380) folE 835821..836234 (+) 414 Protein_798 GTP cyclohydrolase I FolE -
  CVO91_RS04385 (CVO91_04385) - 836237..837136 (+) 900 WP_002941423.1 GntP family permease -
  CVO91_RS04395 (CVO91_04395) - 837464..838612 (-) 1149 Protein_800 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase -
  CVO91_RS04400 (CVO91_04400) - 838811..839977 (+) 1167 WP_002941417.1 MFS transporter -
  CVO91_RS04405 (CVO91_04405) - 840077..840247 (-) 171 WP_002941416.1 DUF3042 family protein -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18567.91 Da        Isoelectric Point: 4.4960

>NTDB_id=215813 CVO91_RS04375 WP_002941426.1 835163..835645(-) (mutX) [Streptococcus suis strain CZ130302]
MTKKPVQLATICYIDNGKEFLLLHRNKKENDVHQGKWIGVGGKLEPGETPQACAIREVFEETGLTVTKHALKGVITFPDF
TPNTDWYTYVFKITGFEGNLIDCNEGDLEWVPYDQVLSKPTWEGDRHFQEWLLEDKPFFSACFRYDGDKLLDYSVDFYEE

Nucleotide


Download         Length: 483 bp        

>NTDB_id=215813 CVO91_RS04375 WP_002941426.1 835163..835645(-) (mutX) [Streptococcus suis strain CZ130302]
ATGACCAAGAAACCTGTCCAACTGGCTACGATTTGCTACATTGATAATGGTAAGGAATTTCTTCTCCTTCATCGAAACAA
GAAAGAAAATGACGTCCATCAAGGTAAATGGATTGGAGTTGGTGGTAAACTAGAACCTGGCGAAACGCCGCAAGCTTGTG
CCATTCGCGAGGTCTTTGAGGAAACTGGACTTACTGTAACAAAGCATGCTCTAAAAGGAGTGATAACCTTCCCAGACTTT
ACTCCAAACACAGACTGGTACACCTATGTCTTTAAGATTACGGGTTTTGAAGGAAATCTTATTGATTGCAACGAAGGCGA
TTTAGAATGGGTTCCTTATGACCAAGTGCTCTCCAAACCAACCTGGGAAGGGGACAGACATTTTCAAGAATGGCTATTAG
AGGACAAACCATTTTTTTCCGCTTGCTTCCGCTATGATGGGGACAAACTGCTTGATTATAGCGTTGATTTTTATGAAGAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(8-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

81.046

95.625

0.775