Detailed information    

insolico Bioinformatically predicted

Overview

Name   chpA   Type   Regulator
Locus tag   BVG18_RS04055 Genome accession   NZ_CP019143
Coordinates   826558..831000 (+) Length   1480 a.a.
NCBI ID   WP_005104052.1    Uniprot ID   N9QIR1
Organism   Acinetobacter lwoffii strain ZS207     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 821558..836000
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BVG18_RS04030 (BVG18_09555) - 822018..822665 (-) 648 WP_005104054.1 hypothetical protein -
  BVG18_RS04035 (BVG18_09560) pilG 822952..823335 (+) 384 WP_004280711.1 twitching motility response regulator PilG Regulator
  BVG18_RS04040 (BVG18_09565) - 823361..823729 (+) 369 WP_004280710.1 response regulator -
  BVG18_RS04045 (BVG18_09570) - 823735..824271 (+) 537 WP_004280709.1 chemotaxis protein CheW -
  BVG18_RS04050 (BVG18_09575) - 824318..826390 (+) 2073 WP_005106253.1 methyl-accepting chemotaxis protein -
  BVG18_RS04055 (BVG18_09580) chpA 826558..831000 (+) 4443 WP_005104052.1 Hpt domain-containing protein Regulator
  BVG18_RS04060 (BVG18_09585) - 831004..831462 (+) 459 WP_086044550.1 hypothetical protein -
  BVG18_RS04065 (BVG18_09590) dapE 831528..832664 (-) 1137 WP_004280705.1 succinyl-diaminopimelate desuccinylase -
  BVG18_RS04070 (BVG18_09595) - 832786..832938 (-) 153 WP_004280704.1 entericidin A/B family lipoprotein -
  BVG18_RS04075 (BVG18_09600) - 833051..833926 (-) 876 WP_004280703.1 DUF1853 family protein -
  BVG18_RS04080 (BVG18_09605) - 834014..834496 (+) 483 WP_086044551.1 YbaN family protein -
  BVG18_RS04085 (BVG18_09610) elsL 834493..835026 (+) 534 WP_004280701.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence

Protein


Download         Length: 1480 a.a.        Molecular weight: 165561.55 Da        Isoelectric Point: 4.3362

>NTDB_id=213379 BVG18_RS04055 WP_005104052.1 826558..831000(+) (chpA) [Acinetobacter lwoffii strain ZS207]
MKEILKNLVETTTLPEDSYLDQDAEILEIFVEEIEEIFVELNALFPEWLSNPDHQENLKTIRRHFHTLKGSGRMVGAKSA
GEMAWAVEDTLNRVLSGSIQLTPTVQKFAQAVLNVYQYALYPKFKHVQQLDLDLRPMVLLGQQLQQQISPEPALEELLAL
ADHLTAEGQMTGLELADNEPSEVELTVAPVELPVRSDIEETVAIFIEEAEEHLETIATFLRTEDEKSQDYNALIRAIHTL
RGSSSMAQIDQIFEASSKVEHLFKTLLQDEIVSTSKETALLIQYAEFVSDYLHLLRQGNTAKLDAVYATFERVWHDYGFA
VTETNSIQTQGLVSKLVELDIDLLLDAEFEFDKRAQVDYPEYIQALSQQAAELLAHTESRAAQGIHEFTADLKLAYDALL
EKPVLLNSDYAYELFAQAHQEFIHLFDTLAAGQRVILNDEIQKILSELSAFVQQDLEIFAEDTSNQNVELSSETTQVAET
GSVDFASLSQRIAADRQQWQSAETNRDFDEELLSIFLEEADELLAGIDEDLNTWSKKQDDTTSLNNLMRHLHTLKGGANM
IAASHIGLIAHELESIYERVIRQQIAVTPALIQIIRLVQDNVSDRIQSIREDGIDYPAPEAIAILQNIQALVSGQAVAAA
ESANAVVKVAEVEATSIPKPQLEESATTEQPATDLAEAEELLEILESPEATEDTPVERSEEDELKSIVEESFLEESEEIL
ANAEKLLNQWFDQRSDRSLLLQLQRAAHSIKGGARMIDVEEVASIAYELETTFEQFAVYQFNSNAYDGLLQKTLVWLRQA
IFQRDYNGFEQLHSSLKKIAYVDVTAQLPERLAKTDNLVVSTDFGFVEGDGTEPPQMMGEWANSGSSDSNNEMIRISADL
VEKMIDLSGENSINRSRIEMDLGQLGNTLNEMELAIKRLADQLRRMEGELESQIIAKHGSENSRYADFDPLEMDQYSSLN
QLSKSLAESASDLVDFKSTLADKIRETEGLLLQQSRIQAEIQESLMRTRLVPFDRMLPRLQRIVRQTSTTLNRPAELIVQ
NTEGELDRNILERLVTPFEHMLRNAIDHGLEDTADRIALNKPEVGSIVLNISRQGTDVIVSFSDDGKGIDAEKIREKALS
LDLIKADQVIDQEEILQFIFHPGFSTAKAVTQISGRGVGLDVVQSEIKSLGGHVSVSSELGKGTVFTIRVPTTVAVSDAL
MVKVGDQQYAISLAQIDRIVRIAPTTLESYFNSKDDYFKIDGANYKLRYLSEFVGNQPIPRLNNVGHSLPVLLIKGNSGQ
TIALLVDQLVGSRAQIVVKPIGQQFANVGVVAGATILGDGQVCLILDGQNVARQIQATQRVKQLNDQRDGSRNSNARRLV
MIVDDSVTVRKVTSRLLERQGYDIVTAKDGVDAIEQLENVRPDLMLLDIEMPRMDGFEVTNLVRHHDIHRDLPIIMITSR
TGEKHRERAFSLGVTHYMGKPFQEAELLANIQQLIAEKQG

Nucleotide


Download         Length: 4443 bp        

>NTDB_id=213379 BVG18_RS04055 WP_005104052.1 826558..831000(+) (chpA) [Acinetobacter lwoffii strain ZS207]
ATGAAAGAAATATTAAAAAATTTAGTTGAAACGACAACGCTTCCTGAAGATAGTTATCTTGACCAAGATGCAGAAATTCT
TGAAATTTTTGTTGAGGAAATCGAAGAGATCTTCGTTGAGTTAAATGCTTTATTTCCAGAATGGTTGAGCAATCCAGATC
ATCAAGAAAATCTGAAGACCATTCGCCGCCATTTTCACACCCTGAAAGGTTCAGGCCGCATGGTCGGGGCAAAATCGGCA
GGGGAAATGGCCTGGGCGGTTGAAGATACCTTAAACCGGGTTTTGTCCGGTTCGATTCAGCTAACACCGACGGTACAGAA
ATTTGCCCAAGCGGTACTGAATGTCTATCAATATGCTTTATATCCAAAATTCAAACATGTACAGCAATTGGATCTCGATC
TGCGTCCAATGGTGCTGTTGGGACAACAATTACAACAACAAATTTCGCCTGAACCTGCGCTAGAAGAATTATTAGCATTG
GCAGATCATTTGACCGCTGAAGGTCAGATGACAGGTCTTGAGCTTGCAGACAATGAGCCAAGTGAAGTTGAGCTAACAGT
AGCTCCAGTAGAATTACCGGTTCGCAGTGATATCGAAGAAACTGTGGCGATCTTTATTGAAGAAGCAGAAGAGCATCTGG
AAACGATAGCCACCTTCCTTCGTACTGAAGATGAAAAATCACAAGATTATAATGCGTTGATTCGTGCGATTCATACCTTG
CGCGGCAGTTCATCCATGGCGCAGATTGACCAGATTTTTGAAGCCAGTTCTAAAGTAGAGCATCTGTTCAAAACCTTGCT
ACAAGATGAAATTGTCTCCACTTCAAAAGAAACTGCTTTACTGATTCAGTATGCCGAGTTTGTCAGTGACTATCTGCATT
TGCTACGTCAGGGCAATACTGCAAAACTGGATGCGGTATACGCCACCTTTGAGCGTGTCTGGCATGATTATGGCTTTGCA
GTTACTGAAACCAATAGCATTCAGACGCAAGGTTTGGTGTCTAAACTGGTTGAGCTGGATATTGATCTGTTATTGGATGC
CGAGTTTGAATTTGATAAACGCGCCCAAGTCGATTATCCGGAATATATTCAGGCACTCAGCCAGCAGGCTGCAGAATTGC
TGGCACATACAGAAAGCCGGGCAGCGCAAGGCATTCATGAATTCACTGCCGACCTGAAATTGGCTTATGATGCGCTGCTT
GAAAAGCCAGTGCTGCTAAACAGCGATTATGCTTATGAACTGTTCGCACAGGCGCATCAGGAATTTATTCATTTATTTGA
TACCTTGGCCGCAGGACAGCGCGTCATTCTGAATGATGAGATTCAAAAAATACTCAGTGAACTGTCTGCATTTGTGCAGC
AGGATCTCGAGATATTTGCTGAAGATACTAGCAATCAGAATGTTGAGCTAAGCTCAGAAACCACACAAGTAGCCGAGACT
GGCAGTGTCGATTTTGCTAGTTTGAGTCAACGCATCGCTGCGGATCGTCAGCAGTGGCAAAGTGCTGAAACTAACCGTGA
TTTTGATGAAGAATTACTAAGTATCTTCCTGGAAGAAGCAGATGAATTGCTGGCAGGCATTGATGAAGATCTGAATACCT
GGAGCAAAAAACAGGACGATACAACTTCGCTGAACAATCTGATGCGTCATTTGCATACCTTAAAAGGTGGTGCAAACATG
ATTGCAGCTTCGCATATCGGTTTGATTGCGCATGAACTGGAAAGTATTTATGAGCGGGTGATTCGTCAGCAAATTGCCGT
GACACCTGCTTTAATCCAGATTATCCGTCTGGTTCAGGACAACGTGTCCGATCGTATTCAATCGATTCGGGAAGACGGTA
TTGATTATCCTGCACCAGAAGCGATTGCGATTCTGCAAAATATTCAGGCGCTGGTTTCTGGACAAGCTGTTGCTGCTGCG
GAGAGCGCGAACGCTGTAGTTAAAGTTGCAGAGGTCGAAGCGACATCAATTCCTAAACCGCAACTTGAAGAGTCAGCAAC
GACTGAACAGCCTGCAACTGATCTGGCTGAAGCTGAAGAATTACTGGAAATCTTGGAATCTCCTGAGGCCACTGAAGACA
CACCAGTAGAACGCTCTGAAGAAGACGAACTGAAATCGATTGTTGAAGAATCTTTCCTTGAAGAATCCGAAGAGATTCTG
GCGAATGCCGAGAAGCTCCTCAATCAATGGTTTGATCAGCGTAGTGACCGTAGTTTATTGCTGCAATTACAGCGTGCTGC
CCACAGTATCAAGGGCGGCGCACGTATGATTGATGTTGAAGAAGTGGCCAGTATTGCCTATGAGCTGGAAACAACTTTCG
AACAGTTTGCGGTCTATCAATTTAACTCGAATGCCTATGATGGCTTATTGCAGAAAACGCTGGTCTGGTTAAGACAGGCG
ATTTTCCAGCGTGACTATAACGGTTTTGAGCAGCTGCACAGCAGTCTGAAAAAGATTGCTTATGTGGACGTTACTGCGCA
ATTGCCTGAGCGTCTGGCGAAAACAGATAATCTGGTGGTCAGTACCGACTTCGGCTTTGTTGAAGGTGATGGTACTGAGC
CGCCACAGATGATGGGTGAGTGGGCGAATAGTGGTAGCAGCGATAGCAATAACGAGATGATCCGTATCTCTGCTGATCTG
GTCGAGAAGATGATTGACCTGTCCGGTGAGAACTCGATTAACCGTTCGCGTATCGAGATGGACCTGGGTCAGCTGGGCAA
TACCTTGAACGAGATGGAACTGGCAATCAAGCGTCTTGCCGATCAGTTACGTCGAATGGAAGGCGAGCTGGAATCACAGA
TTATTGCCAAACATGGTTCAGAGAACTCGCGCTATGCCGACTTTGACCCGCTGGAAATGGACCAATATTCCTCTCTAAAC
CAGCTGTCCAAATCACTGGCAGAATCTGCATCGGATTTGGTCGACTTCAAGAGTACCTTAGCCGACAAGATTCGCGAAAC
CGAAGGACTGTTATTGCAACAATCCCGTATTCAGGCCGAGATTCAGGAAAGCCTGATGCGTACCCGTCTGGTCCCATTTG
ACCGGATGTTGCCGCGTTTACAGCGTATTGTGCGTCAAACCTCGACCACCTTGAACCGTCCTGCAGAACTGATCGTACAG
AATACCGAAGGTGAACTGGATCGTAATATTCTCGAGCGTCTGGTCACACCATTTGAGCATATGCTGCGTAATGCGATTGA
CCATGGCCTGGAAGATACGGCAGATCGTATCGCACTGAACAAGCCGGAAGTGGGTTCGATTGTCTTGAACATCAGCCGCC
AGGGAACCGATGTAATCGTGTCCTTTAGTGATGATGGTAAGGGGATTGATGCAGAGAAGATTCGTGAAAAAGCGCTGAGT
CTGGATCTAATCAAAGCGGATCAAGTCATTGATCAGGAAGAAATCCTGCAATTTATCTTCCATCCCGGTTTCAGTACCGC
GAAAGCAGTGACCCAGATTTCTGGTCGTGGTGTCGGTCTGGACGTGGTACAAAGCGAGATCAAATCATTGGGCGGCCATG
TGTCAGTAAGCTCGGAACTGGGCAAGGGTACGGTCTTTACGATTCGCGTACCGACGACCGTAGCGGTCAGCGATGCCTTG
ATGGTGAAAGTGGGCGATCAGCAATATGCGATTTCTCTGGCACAGATTGACCGAATCGTGCGTATTGCGCCGACCACATT
GGAAAGCTATTTCAACAGTAAAGATGACTATTTCAAGATCGATGGCGCAAACTATAAGCTGCGCTATCTGTCTGAGTTTG
TGGGCAACCAGCCGATTCCACGTCTGAATAATGTTGGGCATTCATTGCCGGTGCTGTTGATTAAAGGAAATAGTGGTCAG
ACCATTGCCTTACTGGTCGATCAGCTGGTCGGTTCACGAGCGCAGATTGTAGTAAAACCGATTGGACAGCAGTTTGCCAA
CGTCGGGGTAGTGGCCGGTGCCACGATTCTGGGTGATGGTCAGGTCTGTCTGATTCTCGATGGACAGAATGTTGCCCGCC
AGATTCAGGCGACACAGCGTGTCAAACAGCTGAATGATCAGCGTGATGGTTCGCGTAATTCAAATGCACGTCGTCTGGTG
ATGATTGTCGATGACTCGGTGACTGTACGTAAAGTGACGTCGCGTCTGCTTGAACGTCAAGGCTATGATATTGTCACTGC
CAAAGATGGCGTAGATGCGATCGAGCAGCTTGAAAACGTCAGACCGGATCTGATGTTGCTGGATATCGAAATGCCGCGCA
TGGACGGTTTCGAAGTGACCAATCTGGTTCGTCACCATGATATTCACCGTGACTTGCCGATTATCATGATTACCTCACGT
ACCGGTGAGAAGCATCGTGAACGTGCATTCAGCCTGGGCGTAACGCACTATATGGGTAAACCGTTCCAGGAAGCGGAATT
GCTGGCCAATATCCAACAACTGATTGCTGAAAAACAGGGGTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(1057-1192)

Hpt domain (Hpt)

(201-270)

Hpt domain (Hpt)

(25-107)

Hpt domain (Hpt)

(710-774)

Hpt domain (Hpt)

(511-598)

CheW-like domain (CheW)

(1199-1334)

Response regulator receiver domain (Response_reg)

(1360-1471)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

61.243

100

0.626

Multiple sequence alignment