Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   BVL33_RS15065 Genome accession   NZ_CP019041
Coordinates   3132227..3133114 (-) Length   295 a.a.
NCBI ID   WP_004958893.1    Uniprot ID   -
Organism   Acinetobacter junii strain 65     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3127227..3138114
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BVL33_RS15045 (BVL33_15045) - 3127606..3128679 (+) 1074 WP_075696805.1 PhoH family protein -
  BVL33_RS15050 (BVL33_15050) ybeY 3128961..3129446 (+) 486 WP_004957796.1 rRNA maturation RNase YbeY -
  BVL33_RS16715 (BVL33_15055) - 3129458..3129757 (+) 300 Protein_2888 antibiotic biosynthesis monooxygenase family protein -
  BVL33_RS15060 (BVL33_15060) - 3129822..3131972 (-) 2151 WP_075696806.1 TonB-dependent siderophore receptor -
  BVL33_RS15065 (BVL33_15065) tonB2 3132227..3133114 (-) 888 WP_004958893.1 energy transducer TonB Machinery gene
  BVL33_RS15070 (BVL33_15070) - 3133359..3134036 (+) 678 WP_004958891.1 hypothetical protein -
  BVL33_RS15075 (BVL33_15075) - 3134232..3134948 (+) 717 WP_004916473.1 DUF3108 domain-containing protein -
  BVL33_RS15080 (BVL33_15080) - 3135037..3135612 (+) 576 WP_004916475.1 xanthine phosphoribosyltransferase -
  BVL33_RS15085 (BVL33_15085) thyA 3135772..3136614 (+) 843 WP_004958886.1 thymidylate synthase -
  BVL33_RS15090 (BVL33_15090) - 3136635..3137144 (+) 510 WP_004958883.1 dihydrofolate reductase -

Sequence

Protein


Download         Length: 295 a.a.        Molecular weight: 33489.04 Da        Isoelectric Point: 8.3911

>NTDB_id=212823 BVL33_RS15065 WP_004958893.1 3132227..3133114(-) (tonB2) [Acinetobacter junii strain 65]
MWNKINFRSELSSHWWQDSIFVGAVILALLLHLAVLAVQFAMPTPSDTSTKEIAVAIRPSTDKVENADFLAQADQKGSGE
FREAHRMSSDMPSPMQADATTGETEFESLEKIQQKRELKFEEKVLMTVLSWQKQAEQSERKKALEDLQSQFQAKAAMVAS
LEAQYLQRQQNFSRKQRIKTVDGIQAKQDASAAYLDKFRQKVELYGNRYYPDAAKQQRLSGEVRLMVILNSQGGIRAIRL
IESSGHSILDEAAKASVRRGAPFGAFDSTMKKDISELRIIRTWRFDPVDAEFEVH

Nucleotide


Download         Length: 888 bp        

>NTDB_id=212823 BVL33_RS15065 WP_004958893.1 3132227..3133114(-) (tonB2) [Acinetobacter junii strain 65]
ATGTGGAATAAAATAAATTTTCGTTCGGAGTTGTCATCTCATTGGTGGCAAGACTCAATTTTTGTAGGGGCTGTGATTTT
AGCATTGCTTCTGCATTTGGCTGTGCTTGCGGTACAGTTTGCTATGCCAACTCCATCCGATACCTCCACAAAGGAAATCG
CAGTTGCTATTCGCCCTAGTACTGATAAAGTAGAAAATGCTGATTTTCTCGCTCAAGCCGATCAAAAGGGTTCAGGTGAG
TTTCGAGAAGCACATCGCATGTCGAGTGATATGCCTTCACCGATGCAGGCGGATGCGACTACTGGTGAAACTGAGTTTGA
AAGCTTAGAAAAAATTCAGCAAAAGCGCGAGTTAAAATTTGAAGAAAAAGTTTTAATGACCGTATTAAGCTGGCAGAAAC
AGGCAGAACAAAGCGAGCGTAAAAAAGCCTTAGAGGATTTACAAAGTCAGTTCCAAGCAAAAGCTGCCATGGTTGCTAGT
CTTGAAGCTCAGTATTTACAACGACAACAAAATTTTAGCCGTAAACAACGGATTAAAACGGTAGATGGTATTCAAGCTAA
ACAGGATGCTTCTGCTGCGTATCTAGATAAATTCCGCCAAAAAGTTGAACTTTATGGAAATCGCTATTACCCAGATGCTG
CTAAACAACAGAGGTTATCGGGTGAAGTTAGATTAATGGTTATTCTGAACTCACAGGGTGGGATACGTGCAATTCGTTTA
ATTGAGAGTTCGGGACATTCTATTTTAGATGAAGCAGCTAAGGCTTCAGTGCGCCGTGGAGCCCCTTTTGGTGCATTTGA
TTCAACGATGAAGAAGGATATTTCTGAATTACGTATCATTCGGACTTGGCGTTTTGATCCCGTGGATGCTGAGTTTGAAG
TGCATTGA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-272)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

76.61

100

0.766

Multiple sequence alignment