Detailed information
Bioinformatically predicted
Overview
| Name | pilR | Type | Regulator |
| Locus tag | AT570_RS08615 | Genome accession | NZ_CP019034 |
| Coordinates | 1804006..1805427 (-) | Length | 473 a.a. |
| NCBI ID | WP_049594865.1 | Uniprot ID | A0A1E3M4U9 |
| Organism | Acinetobacter baumannii strain AB042 | ||
| Function | regulation of type IV pilus assembly (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1799006..1810427
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AT570_RS08600 (AT570_08595) | lptG | 1800059..1801129 (+) | 1071 | WP_000881094.1 | LPS export ABC transporter permease LptG | - |
| AT570_RS08605 (AT570_08600) | gpmI | 1801255..1802802 (+) | 1548 | WP_000128747.1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | - |
| AT570_RS08610 (AT570_08605) | - | 1802818..1804002 (+) | 1185 | WP_000939111.1 | S41 family peptidase | - |
| AT570_RS08615 (AT570_08610) | pilR | 1804006..1805427 (-) | 1422 | WP_049594865.1 | sigma-54-dependent transcriptional regulator | Regulator |
| AT570_RS08620 (AT570_08615) | pilS | 1805452..1807020 (-) | 1569 | WP_001160327.1 | sensor histidine kinase | Regulator |
| AT570_RS08625 (AT570_08620) | - | 1807031..1807666 (-) | 636 | WP_000633799.1 | response regulator | - |
| AT570_RS08630 (AT570_08625) | pbpG | 1807879..1808925 (+) | 1047 | WP_005140205.1 | D-alanyl-D-alanine endopeptidase PBP7/8 | - |
| AT570_RS08635 (AT570_08630) | thrC | 1809034..1810173 (-) | 1140 | WP_000063593.1 | threonine synthase | - |
Sequence
Protein
Download Length: 473 a.a. Molecular weight: 53064.29 Da Isoelectric Point: 6.9051
>NTDB_id=212650 AT570_RS08615 WP_049594865.1 1804006..1805427(-) (pilR) [Acinetobacter baumannii strain AB042]
MAEQQPLVLLVDDEEDLCLLMQMTLARMGIKTHLAYRVEQAKQLFTQFHYDACLTDLNLPDGSGLDLVKHVSQNYPNTPI
AVLTAYGNMDIAIAALKAGAFDFVSKPVNQVHLDQLLQKALNRQKVEHDAAENALENKLLIGRSLPIQQLRIAIKKIARS
QAPVFVTGESGTGKEVVANLVHRLSNRSEGPFIAINCGAIPTELMESELFGHKKGSFTGATQDKQGLILSAHGGSLFLDE
IAELPLSMQVKLLRAVQEKKIRPVGSDQEIDVDFRVISASHQDLDLLVRQGKFRQDLFFRIHVMDLILPPLRERGEDVLL
LANHFIQKICMEWETPSKQLTEAAKTYLLQQHFPGNVRELRNMIERAITLSEDATIDISHLHPAPLRANISNPFVSATQN
IQTTVAAPQVVKKLPSEGLERYLENIEKDILINALNMTHWNRTLAAKKLGMTFRSLRYRLKKFGLDTETEQEV
MAEQQPLVLLVDDEEDLCLLMQMTLARMGIKTHLAYRVEQAKQLFTQFHYDACLTDLNLPDGSGLDLVKHVSQNYPNTPI
AVLTAYGNMDIAIAALKAGAFDFVSKPVNQVHLDQLLQKALNRQKVEHDAAENALENKLLIGRSLPIQQLRIAIKKIARS
QAPVFVTGESGTGKEVVANLVHRLSNRSEGPFIAINCGAIPTELMESELFGHKKGSFTGATQDKQGLILSAHGGSLFLDE
IAELPLSMQVKLLRAVQEKKIRPVGSDQEIDVDFRVISASHQDLDLLVRQGKFRQDLFFRIHVMDLILPPLRERGEDVLL
LANHFIQKICMEWETPSKQLTEAAKTYLLQQHFPGNVRELRNMIERAITLSEDATIDISHLHPAPLRANISNPFVSATQN
IQTTVAAPQVVKKLPSEGLERYLENIEKDILINALNMTHWNRTLAAKKLGMTFRSLRYRLKKFGLDTETEQEV
Nucleotide
Download Length: 1422 bp
>NTDB_id=212650 AT570_RS08615 WP_049594865.1 1804006..1805427(-) (pilR) [Acinetobacter baumannii strain AB042]
ATGGCAGAACAGCAACCACTGGTTTTGCTTGTAGACGATGAAGAAGATTTGTGCCTTTTAATGCAAATGACACTTGCACG
AATGGGGATTAAAACACATCTTGCTTATCGGGTTGAACAGGCCAAACAACTCTTCACTCAGTTTCATTACGATGCGTGTT
TAACCGACTTAAACCTACCCGATGGGAGTGGGTTAGACTTAGTCAAACATGTCTCTCAAAATTATCCCAACACTCCCATT
GCCGTTTTAACTGCCTACGGCAATATGGATATTGCAATTGCAGCATTAAAAGCAGGCGCTTTTGATTTTGTAAGCAAACC
GGTCAACCAAGTACATCTAGATCAATTATTACAAAAAGCCTTGAATCGGCAAAAAGTAGAGCATGATGCTGCCGAGAATG
CGTTAGAAAATAAATTATTAATCGGCCGTTCTCTACCCATCCAGCAGCTACGTATTGCAATTAAAAAAATTGCGCGCTCA
CAAGCACCTGTATTTGTTACCGGTGAGTCTGGAACAGGTAAAGAAGTAGTTGCCAATCTGGTTCATCGGCTGAGTAACCG
TAGTGAAGGCCCTTTTATTGCGATTAATTGCGGTGCTATTCCAACCGAACTGATGGAAAGTGAGTTGTTTGGGCATAAAA
AAGGGAGCTTTACCGGAGCAACTCAAGATAAGCAAGGTCTCATTTTATCGGCACACGGTGGCAGTTTATTTTTAGATGAA
ATTGCCGAATTACCTTTAAGTATGCAGGTCAAACTGCTCCGCGCAGTACAGGAAAAAAAGATCCGACCTGTCGGTTCAGA
TCAGGAAATCGATGTTGATTTCCGTGTGATTAGTGCAAGTCATCAAGATTTAGATTTATTGGTTAGACAAGGTAAATTCC
GTCAAGATTTATTCTTCCGTATTCATGTTATGGACCTCATATTGCCACCTCTACGTGAACGTGGCGAAGATGTCCTTTTA
CTGGCCAATCACTTTATTCAGAAAATTTGTATGGAGTGGGAAACGCCATCTAAACAATTAACAGAAGCGGCCAAAACTTA
TCTGCTACAGCAACACTTTCCGGGTAATGTTCGCGAATTAAGAAATATGATTGAGCGCGCAATTACCTTAAGTGAAGACG
CCACCATAGATATATCTCATTTACATCCTGCTCCTCTAAGAGCGAATATTTCTAATCCTTTTGTTTCGGCTACTCAAAAC
ATACAAACCACTGTGGCGGCTCCTCAAGTCGTAAAAAAATTACCAAGTGAAGGCTTAGAACGTTATTTAGAAAATATTGA
AAAAGATATTTTAATCAATGCCCTCAATATGACTCATTGGAATCGTACCTTAGCAGCTAAAAAATTAGGAATGACTTTCC
GCTCTTTACGCTATCGTCTGAAAAAATTTGGATTAGATACGGAGACAGAACAGGAAGTATAA
ATGGCAGAACAGCAACCACTGGTTTTGCTTGTAGACGATGAAGAAGATTTGTGCCTTTTAATGCAAATGACACTTGCACG
AATGGGGATTAAAACACATCTTGCTTATCGGGTTGAACAGGCCAAACAACTCTTCACTCAGTTTCATTACGATGCGTGTT
TAACCGACTTAAACCTACCCGATGGGAGTGGGTTAGACTTAGTCAAACATGTCTCTCAAAATTATCCCAACACTCCCATT
GCCGTTTTAACTGCCTACGGCAATATGGATATTGCAATTGCAGCATTAAAAGCAGGCGCTTTTGATTTTGTAAGCAAACC
GGTCAACCAAGTACATCTAGATCAATTATTACAAAAAGCCTTGAATCGGCAAAAAGTAGAGCATGATGCTGCCGAGAATG
CGTTAGAAAATAAATTATTAATCGGCCGTTCTCTACCCATCCAGCAGCTACGTATTGCAATTAAAAAAATTGCGCGCTCA
CAAGCACCTGTATTTGTTACCGGTGAGTCTGGAACAGGTAAAGAAGTAGTTGCCAATCTGGTTCATCGGCTGAGTAACCG
TAGTGAAGGCCCTTTTATTGCGATTAATTGCGGTGCTATTCCAACCGAACTGATGGAAAGTGAGTTGTTTGGGCATAAAA
AAGGGAGCTTTACCGGAGCAACTCAAGATAAGCAAGGTCTCATTTTATCGGCACACGGTGGCAGTTTATTTTTAGATGAA
ATTGCCGAATTACCTTTAAGTATGCAGGTCAAACTGCTCCGCGCAGTACAGGAAAAAAAGATCCGACCTGTCGGTTCAGA
TCAGGAAATCGATGTTGATTTCCGTGTGATTAGTGCAAGTCATCAAGATTTAGATTTATTGGTTAGACAAGGTAAATTCC
GTCAAGATTTATTCTTCCGTATTCATGTTATGGACCTCATATTGCCACCTCTACGTGAACGTGGCGAAGATGTCCTTTTA
CTGGCCAATCACTTTATTCAGAAAATTTGTATGGAGTGGGAAACGCCATCTAAACAATTAACAGAAGCGGCCAAAACTTA
TCTGCTACAGCAACACTTTCCGGGTAATGTTCGCGAATTAAGAAATATGATTGAGCGCGCAATTACCTTAAGTGAAGACG
CCACCATAGATATATCTCATTTACATCCTGCTCCTCTAAGAGCGAATATTTCTAATCCTTTTGTTTCGGCTACTCAAAAC
ATACAAACCACTGTGGCGGCTCCTCAAGTCGTAAAAAAATTACCAAGTGAAGGCTTAGAACGTTATTTAGAAAATATTGA
AAAAGATATTTTAATCAATGCCCTCAATATGACTCATTGGAATCGTACCTTAGCAGCTAAAAAATTAGGAATGACTTTCC
GCTCTTTACGCTATCGTCTGAAAAAATTTGGATTAGATACGGAGACAGAACAGGAAGTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilR | Acinetobacter baumannii strain A118 |
98.097 |
100 |
0.981 |
| pilR | Pseudomonas aeruginosa PAK |
51.198 |
97.04 |
0.497 |