Detailed information NTG0209835

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: CR541_RS04950
• Genome accession: NZ_CP024050
• Coordinates: 969884..970954 (+)
• Length: 356 a.a.
• NCBI ID: WP_012775101.1
• Uniprot ID: A0A0H3MV97
• Organism: Streptococcus suis strain CS100322
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 964884..975954

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CR541_RS04920 (CR541_04900)	-	965999..966667 (+)	669	WP_011922395.1	SatD family protein	-
CR541_RS04925 (CR541_04905)	-	966671..967411 (+)	741	WP_011922396.1	DUF3307 domain-containing protein	-
CR541_RS04930 (CR541_04910)	-	967476..967913 (+)	438	WP_011922397.1	AAA family ATPase	-
CR541_RS04945 (CR541_04925)	-	968624..969525 (+)	902	Protein_889	Abi family protein	-
CR541_RS04950 (CR541_04930)	xerS	969884..970954 (+)	1071	WP_012775101.1	tyrosine recombinase XerS	Machinery gene
CR541_RS04955 (CR541_04935)	-	971024..972532 (-)	1509	WP_011922400.1	phosphomannomutase/phosphoglucomutase	-
CR541_RS04960 (CR541_04940)	-	972608..973549 (-)	942	WP_012775102.1	sensor histidine kinase	-
CR541_RS04965 (CR541_04945)	braR	973546..974211 (-)	666	WP_012775103.1	response regulator transcription factor	Regulator
CR541_RS04970 (CR541_04950)	-	974250..974507 (-)	258	WP_011922404.1	type II toxin-antitoxin system RelE family toxin	-
CR541_RS04975 (CR541_04955)	relB	974491..974742 (-)	252	WP_012775104.1	type II toxin-antitoxin system RelB family antitoxin	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41485.66 Da
• Isoelectric Point: 9.2257

>NTDB_id=209835 CR541_RS04950 WP_012775101.1 969884..970954(+) (xerS) [Streptococcus suis strain CS100322]
MRRELLLEKIDQLKEIMPWFVLEYYQSKLAVPYSFTTLYEYLKEYRRFFEWLQDSDLVAVERIADIPLDVLEHLTKKDME
AFILYLRERPLLNANTTQNGVSQTTINRTLSALSSLFKYLTEEVENEQGEPYFYRNVMKKVSTKKKKETLAARAENIKQK
LFLGDETMEFLDYVDKEYQVNLSKRALSSFQKNKERDLAILALLLASGVRLSEAVNLDLRDVNLNMMIIEVTRKGGKRDS
VNVAGFAKPYLEAYMGIRQQRYKAEKTDTAFFLSEYRGLPNRIDASSIEKMVAKYSADFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHANTQVTDLYTHIVNDEQKNALDQL

Nucleotide

• Length: 1071 bp

>NTDB_id=209835 CR541_RS04950 WP_012775101.1 969884..970954(+) (xerS) [Streptococcus suis strain CS100322]
ATGAGACGCGAGTTATTATTGGAAAAAATTGATCAACTAAAAGAAATTATGCCTTGGTTTGTTCTGGAATATTATCAGTC
AAAATTGGCTGTGCCTTACAGTTTTACTACCTTATATGAATACTTGAAAGAATACCGTCGTTTTTTTGAATGGTTACAGG
ATTCGGATTTGGTGGCTGTTGAACGGATTGCTGACATTCCGCTGGATGTTCTGGAACATCTGACAAAAAAAGATATGGAA
GCTTTCATTCTTTATCTGCGGGAGCGTCCCTTGCTGAACGCCAATACCACGCAGAATGGTGTGTCGCAGACCACCATTAA
CCGTACCCTCTCGGCCCTTTCTAGTCTCTTCAAGTATTTAACCGAAGAAGTGGAGAATGAGCAGGGCGAGCCCTACTTCT
ACCGCAATGTCATGAAAAAGGTATCTACTAAGAAGAAGAAGGAAACCTTGGCAGCGCGGGCGGAGAACATCAAGCAAAAG
CTCTTTTTGGGCGATGAAACGATGGAGTTCTTGGACTATGTGGACAAGGAATACCAAGTCAATCTCTCTAAACGTGCCCT
CTCCTCCTTCCAGAAAAATAAGGAGCGGGATTTGGCGATTCTGGCGCTTCTCTTGGCTTCTGGCGTCCGTCTGTCAGAAG
CGGTGAATTTGGATCTTCGAGATGTAAACCTCAATATGATGATTATCGAAGTAACTCGTAAGGGTGGTAAACGGGACTCG
GTCAATGTGGCTGGGTTTGCTAAGCCCTACTTAGAAGCCTACATGGGCATCCGTCAGCAACGCTACAAGGCTGAAAAAAC
GGATACAGCCTTCTTCCTGTCCGAATACCGTGGTCTGCCTAACCGTATCGATGCTTCTTCTATTGAAAAAATGGTTGCCA
AGTACTCTGCGGACTTCAAGATACGCGTAACCCCCCACAAACTCCGTCACACATTGGCAACTCGTCTCTACGACGCCACC
AAGTCGCAAGTTCTAGTCAGTCATCAGCTGGGCCATGCCAATACCCAGGTCACCGATCTCTACACCCATATCGTCAACGA
TGAACAGAAAAATGCTCTGGATCAGTTGTGA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (190-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: A0A0H3MV97

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	83.146	100	0.831