Detailed information NTG0209368

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: CRM98_RS06340
• Genome accession: NZ_CP023867
• Coordinates: 1194992..1195951 (-)
• Length: 319 a.a.
• NCBI ID: WP_002852903.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain FDAARGOS_422
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1189992..1200951

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CRM98_RS06310 (CRM98_06310)	ccoS	1190949..1191155 (+)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-
CRM98_RS06315 (CRM98_06315)	-	1191178..1191480 (-)	303	WP_002852762.1	cytochrome c	-
CRM98_RS06320 (CRM98_06320)	gmhB	1191562..1192122 (+)	561	WP_002878815.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
CRM98_RS06325 (CRM98_06325)	rfaD	1192123..1193076 (+)	954	WP_002852832.1	ADP-glyceromanno-heptose 6-epimerase	-
CRM98_RS06330 (CRM98_06330)	rfaE1	1193069..1194454 (+)	1386	WP_002852777.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
CRM98_RS06335 (CRM98_06335)	gmhA	1194451..1195011 (+)	561	WP_002852775.1	D-sedoheptulose 7-phosphate isomerase	-
CRM98_RS06340 (CRM98_06340)	waaF	1194992..1195951 (-)	960	WP_002852903.1	lipopolysaccharide heptosyltransferase II	Regulator
CRM98_RS06345 (CRM98_06345)	-	1196010..1196822 (+)	813	WP_002852816.1	glycosyltransferase family 2 protein	-
CRM98_RS09085	-	1196814..1197155 (-)	342	WP_002852868.1	hypothetical protein	-
CRM98_RS09090	-	1197200..1197646 (-)	447	WP_002852791.1	hypothetical protein	-
CRM98_RS06355 (CRM98_06355)	-	1197634..1198299 (-)	666	WP_002852731.1	acylneuraminate cytidylyltransferase family protein	-
CRM98_RS06360 (CRM98_06360)	neuC	1198296..1199414 (-)	1119	WP_002852786.1	UDP-N-acetylglucosamine 2-epimerase	-
CRM98_RS06365 (CRM98_06365)	neuB	1199411..1200451 (-)	1041	WP_002852665.1	N-acetylneuraminate synthase	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36766.44 Da
• Isoelectric Point: 10.4054

>NTDB_id=209368 CRM98_RS06340 WP_002852903.1 1194992..1195951(-) (waaF) [Campylobacter jejuni strain FDAARGOS_422]
MKIFIHLPTWLGDAVMASPALYTIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKKLGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKYKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKICPLKHHKCMKDLKPQRVIEEARNLLKNPHL

Nucleotide

• Length: 960 bp

>NTDB_id=209368 CRM98_RS06340 WP_002852903.1 1194992..1195951(-) (waaF) [Campylobacter jejuni strain FDAARGOS_422]
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACACCATAAAAGAACA
TTTTAAAAATGCTCAGTTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGCTATAAACAAGCCCTATCTTTACGCAAAAAACTTGGTAAAATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGTA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCCACAAAATTTACCCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.984	100	0.95