Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   CPQ91_RS10060 Genome accession   NZ_CP023729
Coordinates   1951997..1952368 (+) Length   123 a.a.
NCBI ID   WP_061578589.1    Uniprot ID   -
Organism   Bacillus licheniformis strain ATCC 9789     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 1946997..1957368
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CPQ91_RS10030 (CPQ91_10030) - 1947425..1947658 (+) 234 WP_003182231.1 DUF896 domain-containing protein -
  CPQ91_RS10035 (CPQ91_10035) recP/tkt 1947825..1949828 (+) 2004 WP_009328229.1 transketolase Machinery gene
  CPQ91_RS10040 (CPQ91_10040) sirA 1949983..1950420 (+) 438 WP_003182234.1 sporulation inhibitor of replication protein SirA -
  CPQ91_RS10045 (CPQ91_10045) - 1950505..1950723 (+) 219 WP_003182236.1 YneF family protein -
  CPQ91_RS10050 (CPQ91_10050) - 1950804..1950965 (-) 162 WP_202604361.1 aspartyl-phosphate phosphatase Spo0E family protein -
  CPQ91_RS10055 (CPQ91_10055) - 1951208..1951915 (+) 708 WP_009328224.1 cytochrome c biogenesis protein CcdA -
  CPQ91_RS10060 (CPQ91_10060) spo0A 1951997..1952368 (+) 372 WP_061578589.1 response regulator Regulator
  CPQ91_RS10065 (CPQ91_10065) - 1952442..1952936 (+) 495 WP_085959522.1 CcdC family protein -
  CPQ91_RS10070 (CPQ91_10070) - 1952972..1953400 (-) 429 WP_003182245.1 DUF2621 domain-containing protein -
  CPQ91_RS10075 (CPQ91_10075) - 1953605..1954012 (-) 408 WP_061578590.1 Hsp20/alpha crystallin family protein -
  CPQ91_RS10080 (CPQ91_10080) - 1954148..1954294 (-) 147 WP_003182250.1 small acid-soluble spore protein P -
  CPQ91_RS10085 (CPQ91_10085) sspO 1954336..1954482 (-) 147 WP_003182252.1 small acid-soluble spore protein O -

Sequence

Protein


Download         Length: 123 a.a.        Molecular weight: 13898.32 Da        Isoelectric Point: 4.4895

>NTDB_id=208464 CPQ91_RS10060 WP_061578589.1 1951997..1952368(+) (spo0A) [Bacillus licheniformis strain ATCC 9789]
MTRVLIVDDAKFMRDKIREILETEDLQVAGEAENGEEAVLLYQELQPDLVIMDITMPVKNGIEALKDMIQLNPKVKVIMC
TAMRQKRIVVEAIEAGDKDFIVKPFEETKVVEAIRHVLGNACS

Nucleotide


Download         Length: 372 bp        

>NTDB_id=208464 CPQ91_RS10060 WP_061578589.1 1951997..1952368(+) (spo0A) [Bacillus licheniformis strain ATCC 9789]
ATGACAAGGGTTTTAATTGTTGATGATGCAAAATTTATGAGAGATAAAATTAGAGAAATACTTGAAACAGAAGACTTGCA
AGTCGCGGGTGAAGCCGAGAACGGGGAAGAAGCTGTTTTGCTTTATCAAGAGCTGCAGCCGGACTTGGTTATCATGGATA
TTACGATGCCTGTGAAAAACGGGATAGAAGCTTTAAAGGATATGATCCAGCTGAACCCGAAAGTGAAAGTGATCATGTGT
ACGGCCATGCGGCAAAAGCGGATCGTCGTTGAGGCGATCGAAGCCGGAGACAAGGACTTCATCGTCAAGCCTTTCGAGGA
AACGAAAGTCGTCGAAGCGATTCGGCATGTGCTCGGAAATGCTTGCAGCTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-115)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

36.29

100

0.366