Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | BU_RS02835 | Genome accession | NC_002528 |
| Coordinates | 580878..581393 (-) | Length | 171 a.a. |
| NCBI ID | WP_009874495.1 | Uniprot ID | P57610 |
| Organism | Buchnera aphidicola str. APS (Acyrthosiphon pisum) | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 575878..586393
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BU_RS02825 (BU543) | - | 576996..578576 (-) | 1581 | WP_010896156.1 | peptide chain release factor 3 | - |
| BU_RS02830 (BU544) | - | 579687..580265 (-) | 579 | WP_010896157.1 | NfuA family Fe-S biogenesis protein | - |
| BU_RS02835 (BU545) | ssb | 580878..581393 (-) | 516 | WP_009874495.1 | single-stranded DNA-binding protein | Machinery gene |
| BU_RS02840 (BU546) | dnaB | 582063..583460 (+) | 1398 | WP_009874496.1 | replicative DNA helicase | - |
| BU_RS02845 (BU547) | gshB | 583707..584669 (+) | 963 | WP_010896158.1 | glutathione synthase | - |
| BU_RS02850 (BU548) | ruvX | 584680..585087 (+) | 408 | WP_010896159.1 | Holliday junction resolvase RuvX | - |
| BU_RS02855 (BU549) | - | 585205..585807 (+) | 603 | WP_009874499.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 19355.77 Da Isoelectric Point: 6.1147
>NTDB_id=20685 BU_RS02835 WP_009874495.1 580878..581393(-) (ssb) [Buchnera aphidicola str. APS (Acyrthosiphon pisum)]
MASRGVNKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGENKEKTEWHRIVLFGKLAEIAGEYLRKGSQVYI
EGSLQTRKWQDQNGLERYTTEIIVNIGGTMQMLGNRNSNLQAMTVNDKNSTGIKIKKTDAVEFDKKIETHESNKDLTHSP
SEIDFDDEIPF
MASRGVNKVILIGHLGQDPEVRYMPNGNAVVNMTLATSENWKDKNTGENKEKTEWHRIVLFGKLAEIAGEYLRKGSQVYI
EGSLQTRKWQDQNGLERYTTEIIVNIGGTMQMLGNRNSNLQAMTVNDKNSTGIKIKKTDAVEFDKKIETHESNKDLTHSP
SEIDFDDEIPF
Nucleotide
Download Length: 516 bp
>NTDB_id=20685 BU_RS02835 WP_009874495.1 580878..581393(-) (ssb) [Buchnera aphidicola str. APS (Acyrthosiphon pisum)]
ATGGCAAGTAGAGGTGTAAATAAAGTTATTCTTATTGGTCATTTAGGTCAAGATCCCGAAGTTCGTTATATGCCTAATGG
TAATGCAGTAGTAAATATGACTTTAGCTACTTCAGAGAACTGGAAAGATAAAAATACTGGTGAAAATAAAGAAAAAACAG
AATGGCATAGAATAGTTTTATTTGGAAAATTAGCTGAAATTGCTGGTGAATATCTTCGAAAAGGTTCTCAAGTGTATATT
GAAGGATCGTTGCAAACTAGAAAATGGCAAGATCAAAATGGACTAGAACGTTATACAACAGAAATTATTGTAAATATTGG
TGGTACAATGCAAATGTTAGGCAATCGTAATTCTAACTTGCAGGCAATGACGGTAAATGACAAAAACAGTACCGGAATAA
AAATAAAAAAAACAGATGCAGTAGAGTTTGATAAAAAGATAGAAACACATGAATCGAATAAAGATTTAACTCATTCTCCT
TCGGAAATAGATTTTGATGATGAAATTCCTTTTTAA
ATGGCAAGTAGAGGTGTAAATAAAGTTATTCTTATTGGTCATTTAGGTCAAGATCCCGAAGTTCGTTATATGCCTAATGG
TAATGCAGTAGTAAATATGACTTTAGCTACTTCAGAGAACTGGAAAGATAAAAATACTGGTGAAAATAAAGAAAAAACAG
AATGGCATAGAATAGTTTTATTTGGAAAATTAGCTGAAATTGCTGGTGAATATCTTCGAAAAGGTTCTCAAGTGTATATT
GAAGGATCGTTGCAAACTAGAAAATGGCAAGATCAAAATGGACTAGAACGTTATACAACAGAAATTATTGTAAATATTGG
TGGTACAATGCAAATGTTAGGCAATCGTAATTCTAACTTGCAGGCAATGACGGTAAATGACAAAAACAGTACCGGAATAA
AAATAAAAAAAACAGATGCAGTAGAGTTTGATAAAAAGATAGAAACACATGAATCGAATAAAGATTTAACTCATTCTCCT
TCGGAAATAGATTTTGATGATGAAATTCCTTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
56.497 |
100 |
0.585 |
| ssb | Glaesserella parasuis strain SC1401 |
47.514 |
100 |
0.503 |
| ssb | Neisseria meningitidis MC58 |
43.182 |
100 |
0.444 |
| ssb | Neisseria gonorrhoeae MS11 |
43.182 |
100 |
0.444 |