Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | BOC71_RS09530 | Genome accession | NZ_CP018137 |
| Coordinates | 1734982..1736148 (-) | Length | 388 a.a. |
| NCBI ID | WP_001085462.1 | Uniprot ID | A0A0B7KZM2 |
| Organism | Streptococcus pneumoniae strain SP61 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| ICE | 1728060..1771979 | 1734982..1736148 | within | 0 |
Gene organization within MGE regions
Location: 1728060..1771979
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BOC71_RS09480 (BOC71_01780) | - | 1728357..1728908 (-) | 552 | WP_001111247.1 | hypothetical protein | - |
| BOC71_RS09485 (BOC71_01781) | - | 1728898..1729095 (-) | 198 | WP_000890144.1 | hypothetical protein | - |
| BOC71_RS09490 (BOC71_01782) | - | 1729099..1729893 (-) | 795 | WP_001101215.1 | hypothetical protein | - |
| BOC71_RS09495 (BOC71_01783) | - | 1730301..1730726 (-) | 426 | WP_000204068.1 | hypothetical protein | - |
| BOC71_RS09500 (BOC71_01784) | - | 1730855..1731214 (-) | 360 | WP_000749821.1 | ImmA/IrrE family metallo-endopeptidase | - |
| BOC71_RS09505 (BOC71_01785) | - | 1731260..1731466 (-) | 207 | WP_000366087.1 | hypothetical protein | - |
| BOC71_RS09510 | - | 1731453..1731614 (-) | 162 | WP_000289348.1 | helix-turn-helix domain-containing protein | - |
| BOC71_RS09515 (BOC71_01786) | lytA | 1731973..1732929 (-) | 957 | WP_000405240.1 | N-acetylmuramoyl-L-alanine amidase LytA | - |
| BOC71_RS09520 (BOC71_01787) | - | 1733305..1734675 (-) | 1371 | WP_001036271.1 | MATE family efflux transporter | - |
| BOC71_RS09530 (BOC71_01788) | recA | 1734982..1736148 (-) | 1167 | WP_001085462.1 | recombinase RecA | Machinery gene |
| BOC71_RS09535 (BOC71_01789) | cinA | 1736203..1737459 (-) | 1257 | WP_000642704.1 | competence/damage-inducible protein A | Machinery gene |
| BOC71_RS09540 (BOC71_01790) | brpA | 1737544..1738560 (-) | 1017 | WP_000239278.1 | biofilm formation/cell division transcriptional regulator BrpA | - |
| BOC71_RS09545 (BOC71_01791) | - | 1738568..1739086 (-) | 519 | WP_000455536.1 | GNAT family N-acetyltransferase | - |
| BOC71_RS09550 (BOC71_01792) | tsaE | 1739076..1739519 (-) | 444 | WP_000288230.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE | - |
| BOC71_RS09555 (BOC71_01793) | comM | 1739605..1740225 (-) | 621 | WP_000839909.1 | hypothetical protein | Regulator |
| BOC71_RS09560 (BOC71_01794) | - | 1740531..1741394 (-) | 864 | WP_001093609.1 | helix-turn-helix domain-containing protein | - |
| BOC71_RS12580 (BOC71_01795) | - | 1741586..1741756 (+) | 171 | WP_001227863.1 | PhrA family quorum-sensing system peptide | - |
| BOC71_RS09570 (BOC71_01796) | - | 1742158..1742472 (+) | 315 | WP_000420682.1 | YdcP family protein | - |
| BOC71_RS09575 (BOC71_01797) | - | 1742488..1742874 (+) | 387 | WP_000985015.1 | YdcP family protein | - |
| BOC71_RS09580 (BOC71_01798) | - | 1742903..1744288 (+) | 1386 | WP_000813494.1 | FtsK/SpoIIIE domain-containing protein | - |
| BOC71_RS09585 | - | 1744291..1744443 (+) | 153 | WP_000879507.1 | hypothetical protein | - |
| BOC71_RS09590 (BOC71_01799) | mobT | 1744466..1745728 (+) | 1263 | WP_001814870.1 | MobT family relaxase | - |
| BOC71_RS09595 | - | 1745673..1745885 (+) | 213 | WP_029645760.1 | peptide-binding protein | - |
| BOC71_RS09600 | - | 1745934..1746017 (+) | 84 | WP_001814874.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| BOC71_RS09605 (BOC71_01800) | erm(B) | 1746142..1746879 (+) | 738 | WP_001038795.1 | 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) | - |
| BOC71_RS09610 (BOC71_01802) | - | 1747136..1748383 (-) | 1248 | WP_000019067.1 | ISL3 family transposase | - |
| BOC71_RS09615 (BOC71_01803) | - | 1748563..1748784 (+) | 222 | WP_001009056.1 | hypothetical protein | - |
| BOC71_RS09620 (BOC71_01804) | - | 1748901..1749398 (+) | 498 | WP_000342539.1 | antirestriction protein ArdA | - |
| BOC71_RS09625 (BOC71_01805) | - | 1749487..1749879 (+) | 393 | WP_000723888.1 | conjugal transfer protein | - |
| BOC71_RS09630 (BOC71_01806) | - | 1749863..1752310 (+) | 2448 | WP_000331160.1 | ATP-binding protein | - |
| BOC71_RS09635 (BOC71_01807) | - | 1752313..1754490 (+) | 2178 | WP_001814875.1 | CD3337/EF1877 family mobilome membrane protein | - |
| BOC71_RS09640 (BOC71_01808) | - | 1754487..1755488 (+) | 1002 | WP_000769868.1 | lysozyme family protein | - |
| BOC71_RS09645 (BOC71_01809) | - | 1755485..1756417 (+) | 933 | WP_001224318.1 | conjugal transfer protein | - |
| BOC71_RS12845 | - | 1756731..1756778 (+) | 48 | Protein_1761 | hypothetical protein | - |
| BOC71_RS09655 (BOC71_01810) | tet(M) | 1756794..1758713 (+) | 1920 | WP_000691729.1 | tetracycline resistance ribosomal protection protein Tet(M) | - |
| BOC71_RS09665 (BOC71_01811) | - | 1759077..1759322 (+) | 246 | WP_001813542.1 | hypothetical protein | - |
| BOC71_RS09670 (BOC71_01812) | - | 1759319..1759654 (+) | 336 | WP_000806926.1 | hypothetical protein | - |
| BOC71_RS09675 (BOC71_01813) | - | 1759667..1760035 (+) | 369 | WP_000567222.1 | hypothetical protein | - |
| BOC71_RS09680 (BOC71_01814) | - | 1760022..1760321 (+) | 300 | WP_001072467.1 | DUF5960 family protein | - |
| BOC71_RS09685 (BOC71_01815) | msr(D) | 1760439..1761902 (-) | 1464 | WP_000420313.1 | ABC-F type ribosomal protection protein Msr(D) | - |
| BOC71_RS09690 (BOC71_01816) | mef(A) | 1762022..1763239 (-) | 1218 | WP_000417519.1 | macrolide efflux MFS transporter Mef(A) | - |
| BOC71_RS09695 (BOC71_01817) | - | 1763625..1763795 (-) | 171 | WP_000873143.1 | hypothetical protein | - |
| BOC71_RS09700 | - | 1764317..1764508 (+) | 192 | WP_001860868.1 | cysteine-rich KTR domain-containing protein | - |
| BOC71_RS09705 (BOC71_01818) | - | 1764568..1764921 (-) | 354 | WP_001227347.1 | helix-turn-helix transcriptional regulator | - |
| BOC71_RS09710 (BOC71_01819) | - | 1765426..1765848 (+) | 423 | WP_000804885.1 | sigma-70 family RNA polymerase sigma factor | - |
| BOC71_RS09715 (BOC71_01820) | - | 1765845..1766075 (+) | 231 | WP_000857133.1 | helix-turn-helix domain-containing protein | - |
| BOC71_RS12470 | - | 1766301..1766552 (-) | 252 | WP_001845478.1 | hypothetical protein | - |
| BOC71_RS09725 (BOC71_01821) | - | 1766536..1766739 (+) | 204 | WP_000814511.1 | excisionase | - |
| BOC71_RS09730 (BOC71_01822) | - | 1766821..1768038 (+) | 1218 | WP_001291561.1 | tyrosine-type recombinase/integrase | - |
| BOC71_RS09740 (BOC71_01823) | - | 1768929..1770944 (+) | 2016 | WP_000732395.1 | DUF1430 domain-containing protein | - |
| BOC71_RS09745 (BOC71_01824) | - | 1770946..1771578 (+) | 633 | WP_000571425.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 388 a.a. Molecular weight: 41949.78 Da Isoelectric Point: 4.8403
>NTDB_id=206157 BOC71_RS09530 WP_001085462.1 1734982..1736148(-) (recA) [Streptococcus pneumoniae strain SP61]
MAKKPKKLEEISKKFGAEREKALNDALKLIEKDFGKGSIMRLGERAEQKVQVMSSGSLALDIALGSGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDQKETNVGKETKIKVVKNKVAPPFKEAVVEIMYGEGISKTGELLKIASDLDIIKKAGAWYSYKDEKIGQGSE
NAKKYLAEHPEIFDEIDKQVRSKFGLIDGEEVSEQDTENKKDEPKKEEAVNEEVPLDLGDELEIEIEE
MAKKPKKLEEISKKFGAEREKALNDALKLIEKDFGKGSIMRLGERAEQKVQVMSSGSLALDIALGSGGYPKGRIIEIYGP
ESSGKTTVALHAVAQAQKEGGIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGAVDLVVVDSVA
ALVPRAEIDGDIGDSHVGLQARMMSQAMRKLGASINKTKTIAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRG
NTQIKGTGDQKETNVGKETKIKVVKNKVAPPFKEAVVEIMYGEGISKTGELLKIASDLDIIKKAGAWYSYKDEKIGQGSE
NAKKYLAEHPEIFDEIDKQVRSKFGLIDGEEVSEQDTENKKDEPKKEEAVNEEVPLDLGDELEIEIEE
Nucleotide
Download Length: 1167 bp
>NTDB_id=206157 BOC71_RS09530 WP_001085462.1 1734982..1736148(-) (recA) [Streptococcus pneumoniae strain SP61]
ATGGCGAAAAAACCAAAAAAATTAGAAGAAATTTCAAAAAAATTTGGGGCAGAACGTGAAAAGGCCTTGAATGACGCTCT
TAAATTGATTGAGAAAGACTTTGGTAAAGGATCAATCATGCGTTTGGGTGAACGTGCGGAGCAAAAGGTGCAAGTGATGA
GCTCAGGTTCTTTAGCTCTTGACATTGCCCTTGGCTCAGGTGGTTATCCTAAGGGACGTATCATCGAAATCTATGGCCCA
GAGTCATCTGGTAAGACAACGGTTGCCCTTCATGCAGTTGCACAAGCGCAAAAAGAAGGTGGGATTGCTGCCTTTATCGA
TGCGGAACATGCCCTTGATCCAGCTTATGCTGCGGCCCTTGGTGTCAATATTGACGAATTGCTCTTGTCTCAACCAGACT
CAGGAGAGCAAGGTCTTGAGATTGCGGGAAAATTGATTGACTCAGGTGCAGTTGATCTTGTCGTAGTCGACTCAGTTGCT
GCCCTTGTTCCTCGTGCGGAAATTGATGGAGATATCGGAGATAGCCATGTTGGTTTGCAGGCTCGTATGATGAGCCAGGC
CATGCGTAAACTTGGCGCCTCTATCAATAAAACCAAAACAATTGCCATTTTTATCAACCAATTGCGTGAAAAAGTTGGAG
TGATGTTTGGAAATCCAGAAACAACACCGGGCGGACGTGCTTTGAAATTCTATGCTTCAGTCCGCTTGGATGTTCGTGGT
AATACACAAATTAAGGGAACTGGTGATCAAAAAGAAACCAATGTCGGTAAAGAAACTAAGATTAAGGTTGTAAAAAATAA
GGTAGCTCCACCGTTTAAGGAAGCCGTAGTTGAAATTATGTACGGAGAAGGAATTTCTAAGACTGGTGAGCTTTTGAAGA
TTGCAAGCGATTTGGATATTATCAAAAAAGCAGGGGCTTGGTATTCTTACAAAGATGAAAAAATTGGGCAAGGTTCTGAG
AATGCTAAGAAATACTTGGCAGAGCACCCAGAAATCTTTGATGAAATTGATAAGCAAGTCCGTTCTAAATTTGGCTTGAT
TGATGGAGAAGAAGTTTCAGAACAAGATACTGAAAACAAAAAAGATGAGCCAAAGAAAGAAGAAGCAGTGAATGAAGAAG
TTCCGCTTGACTTAGGCGATGAACTTGAAATCGAAATTGAAGAATAA
ATGGCGAAAAAACCAAAAAAATTAGAAGAAATTTCAAAAAAATTTGGGGCAGAACGTGAAAAGGCCTTGAATGACGCTCT
TAAATTGATTGAGAAAGACTTTGGTAAAGGATCAATCATGCGTTTGGGTGAACGTGCGGAGCAAAAGGTGCAAGTGATGA
GCTCAGGTTCTTTAGCTCTTGACATTGCCCTTGGCTCAGGTGGTTATCCTAAGGGACGTATCATCGAAATCTATGGCCCA
GAGTCATCTGGTAAGACAACGGTTGCCCTTCATGCAGTTGCACAAGCGCAAAAAGAAGGTGGGATTGCTGCCTTTATCGA
TGCGGAACATGCCCTTGATCCAGCTTATGCTGCGGCCCTTGGTGTCAATATTGACGAATTGCTCTTGTCTCAACCAGACT
CAGGAGAGCAAGGTCTTGAGATTGCGGGAAAATTGATTGACTCAGGTGCAGTTGATCTTGTCGTAGTCGACTCAGTTGCT
GCCCTTGTTCCTCGTGCGGAAATTGATGGAGATATCGGAGATAGCCATGTTGGTTTGCAGGCTCGTATGATGAGCCAGGC
CATGCGTAAACTTGGCGCCTCTATCAATAAAACCAAAACAATTGCCATTTTTATCAACCAATTGCGTGAAAAAGTTGGAG
TGATGTTTGGAAATCCAGAAACAACACCGGGCGGACGTGCTTTGAAATTCTATGCTTCAGTCCGCTTGGATGTTCGTGGT
AATACACAAATTAAGGGAACTGGTGATCAAAAAGAAACCAATGTCGGTAAAGAAACTAAGATTAAGGTTGTAAAAAATAA
GGTAGCTCCACCGTTTAAGGAAGCCGTAGTTGAAATTATGTACGGAGAAGGAATTTCTAAGACTGGTGAGCTTTTGAAGA
TTGCAAGCGATTTGGATATTATCAAAAAAGCAGGGGCTTGGTATTCTTACAAAGATGAAAAAATTGGGCAAGGTTCTGAG
AATGCTAAGAAATACTTGGCAGAGCACCCAGAAATCTTTGATGAAATTGATAAGCAAGTCCGTTCTAAATTTGGCTTGAT
TGATGGAGAAGAAGTTTCAGAACAAGATACTGAAAACAAAAAAGATGAGCCAAAGAAAGAAGAAGCAGTGAATGAAGAAG
TTCCGCTTGACTTAGGCGATGAACTTGAAATCGAAATTGAAGAATAA
Similar proteins
Only experimentally validated proteins are listed.