Detailed information NTG0020613

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: SMA_0166
• Genome accession: HE613569
• Coordinates: 166676..167944 (-)
• Length: 422 a.a.
• NCBI ID: CCF01457.1
• Uniprot ID: -
• Organism: Streptococcus macedonicus ACA-DC 198
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 161676..172944

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SMA_0161	-	162251..163504 (+)	1254	CCF01452.1	Major facilitator superfamily MFS_1	-
SMA_0162	-	163506..164732 (+)	1227	CCF01453.1	Hypothetical protein	-
SMA_0163	-	165025..165360 (-)	336	CCF01454.1	Hypothetical protein	-
SMA_0164	-	165341..166206 (+)	866	CCF01455.1	Integrase	-
SMA_0165	-	166367..166550 (-)	184	Protein_164	Hypothetical protein	-
SMA_0166	rarA	166676..167944 (-)	1269	CCF01457.1	Chromosome segregation helicase	Machinery gene
SMA_0167	ypeA	167934..168428 (-)	495	CCF01458.1	Acetyltransferase, GNAT family	-
SMA_0168	-	168492..168962 (+)	471	CCF01459.1	Hypothetical protein	-
SMA_0169	-	168964..169863 (+)	900	CCF01460.1	Hypothetical protein	-
SMA_0170	prmA	170194..171147 (+)	954	CCF01461.1	Ribosomal protein L11 methyltransferase	-
SMA_0171	rsmE	171148..171891 (+)	744	CCF01462.1	Ribosomal RNA small subunit methyltransferase E	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46521.82 Da
• Isoelectric Point: 6.0184

>NTDB_id=20613 SMA_0166 CCF01457.1 166676..167944(-) (rarA) [Streptococcus macedonicus ACA-DC 198]
MPNNLALRMRPKNIDQVIGQKHLVGEGKIIRRMVEANMLSSMILYGPPGIGKTSIASAIAGTTKYAFRTFNATTDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKTKQDFLLPLLENGNIIMIGATTENPFFSVTPAIRSRVQIFELEPLSTDDIKTALQ
TALSDKERGFDFDVDIDVDALDFIATATNGDLRSAFNSLDLAVMSTKADDNGLRHISLDTVENSLQRSYITMDKDGDGHY
DVLSALQKSIRGSDVNASLHYAARLIEAGDLPSLARRLTVIAYEDIGLANPDAQIHTVMALDAAQRIGFPEARILIANVV
IDLALSPKSNSAITAIDKAISDLHQNGNLPIPRHLRDGHYAGSKELGNAQSYKYPHDYPEKWVKQQYLPDKLVGKNYFDA
NQTGKYERALGANKEQIDELSK

Nucleotide

• Length: 1269 bp

>NTDB_id=20613 SMA_0166 CCF01457.1 166676..167944(-) (rarA) [Streptococcus macedonicus ACA-DC 198]
ATGCCAAATAATCTCGCTTTGCGAATGCGCCCTAAGAATATTGACCAAGTGATTGGGCAGAAGCATCTAGTCGGTGAAGG
AAAAATCATTCGCCGTATGGTGGAGGCCAATATGTTGTCATCAATGATTCTCTACGGTCCTCCTGGTATCGGGAAGACCT
CAATCGCTAGCGCTATCGCAGGAACAACCAAATACGCTTTTCGAACGTTCAACGCTACAACAGACAGCAAAAAGCGCCTG
CAAGAAATTGCCGAGGAAGCTAAATTTTCTGGCGGTTTAGTCTTACTGCTTGACGAAATTCACCGCTTAGATAAAACCAA
GCAAGATTTCTTGCTACCTTTACTTGAAAATGGCAATATTATCATGATTGGGGCAACAACTGAAAATCCTTTCTTTTCAG
TGACGCCAGCCATTCGCTCAAGGGTACAAATTTTTGAATTAGAACCTTTGTCAACTGATGACATAAAGACAGCTTTGCAA
ACAGCTTTATCTGATAAAGAGCGCGGATTTGATTTTGATGTTGATATTGATGTCGATGCGCTTGATTTCATTGCAACGGC
AACCAACGGCGACCTACGCTCAGCTTTTAATTCGCTTGATTTAGCGGTCATGTCAACCAAAGCAGATGATAACGGACTGC
GCCACATTAGCCTTGACACCGTTGAAAATAGCTTGCAGCGCAGTTATATTACCATGGATAAAGACGGTGACGGTCACTAT
GATGTGCTGTCAGCTTTGCAAAAATCCATTCGCGGCTCTGATGTCAATGCTAGTCTGCACTACGCCGCTCGTCTGATTGA
AGCTGGTGATTTGCCAAGCCTTGCTCGCAGGCTGACTGTGATTGCTTACGAGGATATTGGGCTTGCTAATCCTGACGCTC
AAATTCATACGGTCATGGCCCTTGATGCTGCCCAAAGAATTGGTTTTCCTGAAGCACGTATCTTAATTGCCAACGTCGTA
ATTGACCTTGCCTTATCACCAAAATCAAATTCTGCCATTACAGCGATTGACAAGGCTATCAGCGACCTTCATCAAAATGG
AAATCTGCCAATTCCACGTCATCTACGCGACGGACATTACGCTGGCAGCAAAGAATTGGGCAACGCACAAAGCTACAAAT
ACCCTCATGATTATCCTGAAAAATGGGTTAAACAGCAGTATTTACCAGATAAGTTAGTCGGAAAAAATTATTTTGATGCT
AACCAAACTGGGAAATACGAGCGTGCCCTCGGTGCTAACAAAGAGCAAATTGATGAACTATCTAAATAA

Domains

Predicted by InterProScan.

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

• AAA C-terminal domain (AAA_assoc_2) (173-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	60.382	99.289	0.6