Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   BRL64_RS07040 Genome accession   NZ_CP018100
Coordinates   1359494..1359955 (-) Length   153 a.a.
NCBI ID   WP_008356877.1    Uniprot ID   -
Organism   Bacillus safensis strain BRM1     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1354494..1364955
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BRL64_RS07020 (BRL64_06895) - 1355098..1355982 (+) 885 WP_081124324.1 cation diffusion facilitator family transporter -
  BRL64_RS19565 - 1356047..1356199 (-) 153 WP_162842519.1 hypothetical protein -
  BRL64_RS07025 (BRL64_06900) - 1356502..1357041 (+) 540 WP_081124325.1 RDD family protein -
  BRL64_RS07030 (BRL64_06905) - 1357166..1358476 (+) 1311 WP_034281575.1 MFS transporter -
  BRL64_RS07035 (BRL64_06910) - 1358550..1359458 (+) 909 WP_024424709.1 chemotaxis protein -
  BRL64_RS07040 (BRL64_06915) kre 1359494..1359955 (-) 462 WP_008356877.1 YkyB family protein Regulator
  BRL64_RS19570 - 1360469..1360645 (+) 177 WP_169737552.1 hypothetical protein -
  BRL64_RS07045 (BRL64_06920) - 1360772..1361689 (-) 918 WP_081124326.1 AraC family transcriptional regulator -
  BRL64_RS07050 (BRL64_06925) - 1361803..1362699 (+) 897 WP_081124327.1 DMT family transporter -
  BRL64_RS07055 (BRL64_06930) - 1362852..1363067 (-) 216 WP_024424712.1 hypothetical protein -
  BRL64_RS07060 (BRL64_06935) - 1363326..1364603 (-) 1278 WP_034281582.1 MFS transporter -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17711.30 Da        Isoelectric Point: 10.2452

>NTDB_id=205758 BRL64_RS07040 WP_008356877.1 1359494..1359955(-) (kre) [Bacillus safensis strain BRM1]
MDDYAHTKDIEPTAENIAKAIYTVNRHAKTAPNPKFLYLLKKRALQKLLQEGKGRKVGLHFSNNPKYSQQQSDVLIEIGD
YYFHLPPTKEDFEFLPHLGNLNQSYRNPKANMSLNRAKQILQTYVGLKEKPAATKQKSHYTKPVFKRLGESYF

Nucleotide


Download         Length: 462 bp        

>NTDB_id=205758 BRL64_RS07040 WP_008356877.1 1359494..1359955(-) (kre) [Bacillus safensis strain BRM1]
ATGGACGATTATGCTCATACTAAAGACATAGAACCTACAGCAGAAAACATCGCAAAAGCCATTTATACTGTTAACCGCCA
TGCTAAAACCGCACCAAACCCCAAGTTTCTTTATCTTTTGAAAAAACGCGCGCTGCAAAAACTATTGCAAGAAGGTAAAG
GAAGAAAAGTGGGCCTACATTTCTCTAACAATCCCAAGTATAGTCAACAACAGTCCGACGTGCTGATTGAAATTGGAGAT
TATTATTTTCACCTGCCACCAACGAAAGAAGACTTCGAATTTTTGCCACACTTAGGAAATTTAAATCAATCATATCGCAA
TCCGAAAGCGAATATGTCATTAAACCGAGCAAAGCAAATACTTCAAACGTATGTCGGTTTAAAAGAAAAACCTGCCGCCA
CAAAACAAAAATCACATTACACAAAGCCCGTCTTCAAACGACTCGGGGAAAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

75.974

100

0.765

Multiple sequence alignment