Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   BKN48_RS17750 Genome accession   NZ_CP017676
Coordinates   3373143..3373727 (+) Length   194 a.a.
NCBI ID   WP_014113628.1    Uniprot ID   A0A0D1L215
Organism   Bacillus subtilis strain VV2     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3368143..3378727
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BKN48_RS17720 (BKN48_17720) dapD 3368330..3369040 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  BKN48_RS17725 (BKN48_17725) dapI 3369110..3370234 (+) 1125 WP_070548895.1 N-acetyldiaminopimelate deacetylase -
  BKN48_RS17730 (BKN48_17730) ykuS 3370296..3370541 (+) 246 WP_003232382.1 YkuS family protein -
  BKN48_RS17735 (BKN48_17735) mscT 3370578..3371381 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  BKN48_RS17740 (BKN48_17740) ahpA 3371618..3372160 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  BKN48_RS17745 (BKN48_17745) ykuV 3372231..3372677 (+) 447 WP_014476671.1 thiol-disulfide oxidoreductase YkuV -
  BKN48_RS17750 (BKN48_17750) rok 3373143..3373727 (+) 585 WP_014113628.1 transcriptional regulator Rok Regulator
  BKN48_RS17755 (BKN48_17755) cse15 3373768..3374733 (-) 966 WP_021479381.1 spore protein Cse15 -
  BKN48_RS17760 (BKN48_17760) mobA 3374870..3375469 (+) 600 WP_021479380.1 molybdenum cofactor guanylyltransferase -
  BKN48_RS17765 (BKN48_17765) moeB 3375520..3376539 (+) 1020 WP_021479379.1 molybdopterin-synthase adenylyltransferase MoeB -
  BKN48_RS17770 (BKN48_17770) glp 3376557..3377849 (+) 1293 WP_064671332.1 gephyrin-like molybdotransferase Glp -
  BKN48_RS17775 (BKN48_17775) mobB 3377810..3378331 (+) 522 WP_049139878.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 194 a.a.        Molecular weight: 22127.12 Da        Isoelectric Point: 9.7036

>NTDB_id=201528 BKN48_RS17750 WP_014113628.1 3373143..3373727(+) (rok) [Bacillus subtilis strain VV2]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESAESANE

Nucleotide


Download         Length: 585 bp        

>NTDB_id=201528 BKN48_RS17750 WP_014113628.1 3373143..3373727(+) (rok) [Bacillus subtilis strain VV2]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCGAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCCGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAACCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTGAATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1L215

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

97.423

0.974

Multiple sequence alignment