Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   CG450_RS04700 Genome accession   NZ_CP022477
Coordinates   952466..953335 (+) Length   289 a.a.
NCBI ID   WP_011198252.1    Uniprot ID   Q8VQ63
Organism   Bacillus licheniformis strain BL-010     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 947466..958335
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CG450_RS04670 - 947824..948375 (+) 552 WP_003184868.1 cysteine hydrolase family protein -
  CG450_RS04675 - 948393..949862 (+) 1470 WP_003184866.1 nicotinate phosphoribosyltransferase -
  CG450_RS04680 - 950041..951261 (+) 1221 WP_003184864.1 EAL and HDOD domain-containing protein -
  CG450_RS04685 - 951304..951651 (-) 348 WP_009329512.1 hypothetical protein -
  CG450_RS04695 degQ 952137..952277 (+) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  CG450_RS04700 comQ 952466..953335 (+) 870 WP_011198252.1 polyprenyl synthetase family protein Regulator
  CG450_RS04705 comX 953350..953514 (+) 165 WP_011198251.1 competence pheromone ComX -
  CG450_RS04710 comP 953554..955875 (+) 2322 WP_026080865.1 ATP-binding protein Regulator
  CG450_RS04715 comA 955962..956600 (+) 639 WP_003184849.1 response regulator transcription factor Regulator
  CG450_RS04720 - 956617..957006 (+) 390 WP_003184847.1 hotdog fold thioesterase -
  CG450_RS04725 mnhG 957046..957420 (-) 375 WP_003184844.1 monovalent cation/H(+) antiporter subunit G -
  CG450_RS04730 - 957404..957688 (-) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  CG450_RS04735 - 957688..958164 (-) 477 WP_003184840.1 Na+/H+ antiporter subunit E -

Sequence

Protein


Download         Length: 289 a.a.        Molecular weight: 32743.41 Da        Isoelectric Point: 4.6799

>NTDB_id=200952 CG450_RS04700 WP_011198252.1 952466..953335(+) (comQ) [Bacillus licheniformis strain BL-010]
MNHFIDLEIPNADLNRTLHAFLDAKDQLHFSELAFYHYQSFGGTDTDAAETLGAGIELLILAFDIFDDLEDEDSPDEPWM
KINRSVAMNAATALYTISIKVIGSVSKEPVFFEKLMEYTLQSMQGQHDDLSNRPATEDECLDMIKRKSGALTALPCVLGA
MLATGKFDPTVEKYAYQLGIASQIENDYKALFYDSKSDIAKKKRTLAYLYLSRKFNQPSIDLLKTFETEDKIADKEIKCY
KEKLKAAGVTQYMYVMNQLAIQKFKKGIGELELGDMEKERLMSTLLNNN

Nucleotide


Download         Length: 870 bp        

>NTDB_id=200952 CG450_RS04700 WP_011198252.1 952466..953335(+) (comQ) [Bacillus licheniformis strain BL-010]
ATGAATCATTTTATAGACCTTGAGATTCCCAATGCGGACTTAAATCGGACGCTGCACGCTTTTCTAGATGCAAAGGACCA
GTTGCATTTCAGCGAGCTTGCTTTTTATCATTACCAAAGTTTCGGCGGCACGGACACCGATGCGGCAGAAACCCTTGGAG
CAGGCATTGAACTCTTGATTCTTGCGTTTGATATATTCGATGATTTAGAGGATGAAGACAGCCCCGATGAACCTTGGATG
AAAATCAACCGTTCAGTCGCAATGAATGCGGCGACTGCGCTTTATACAATAAGCATTAAAGTGATCGGTTCGGTGTCGAA
AGAACCGGTGTTTTTCGAAAAGCTAATGGAATATACACTTCAATCGATGCAGGGACAGCATGACGATCTCAGCAACCGCC
CTGCCACTGAAGATGAGTGCCTTGACATGATCAAGCGTAAATCCGGGGCGCTGACAGCCTTGCCATGCGTGCTGGGAGCT
ATGCTTGCTACGGGCAAATTTGACCCGACGGTTGAAAAGTACGCCTACCAGCTGGGCATTGCTTCACAAATTGAAAATGA
TTATAAAGCACTTTTTTATGATTCAAAAAGCGATATCGCCAAGAAAAAGCGGACGCTTGCGTATTTATATTTGTCAAGAA
AATTTAACCAGCCGTCGATTGATTTGTTAAAAACATTTGAAACTGAGGATAAAATTGCCGATAAAGAAATAAAATGCTAT
AAAGAGAAATTGAAGGCAGCAGGCGTCACTCAGTATATGTATGTTATGAATCAGCTCGCTATTCAGAAATTTAAGAAGGG
AATCGGGGAGCTTGAGTTGGGGGATATGGAGAAAGAACGTTTGATGTCTACCCTGCTGAATAACAATTAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(41-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8VQ63

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45.361

100

0.457