Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   CGZ53_RS06275 Genome accession   NZ_CP022435
Coordinates   1232614..1233294 (-) Length   226 a.a.
NCBI ID   WP_012658720.1    Uniprot ID   B9DUQ8
Organism   Streptococcus uberis strain NZ01     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1227614..1238294
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CGZ53_RS06260 (CGZ53_06255) sodA 1228587..1229195 (-) 609 WP_012658717.1 superoxide dismutase SodA -
  CGZ53_RS06265 (CGZ53_06260) holA 1229292..1230332 (-) 1041 WP_100912142.1 DNA polymerase III subunit delta -
  CGZ53_RS06270 (CGZ53_06265) comEC/celB 1230375..1232633 (-) 2259 WP_100912143.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  CGZ53_RS06275 (CGZ53_06270) comEA/celA/cilE 1232614..1233294 (-) 681 WP_012658720.1 helix-hairpin-helix domain-containing protein Machinery gene
  CGZ53_RS06280 (CGZ53_06275) - 1233357..1234097 (-) 741 WP_012658721.1 lysophospholipid acyltransferase family protein -
  CGZ53_RS06285 (CGZ53_06280) - 1234220..1235005 (+) 786 WP_046388252.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  CGZ53_RS06290 (CGZ53_06285) - 1235046..1235315 (+) 270 WP_012658723.1 GIY-YIG nuclease family protein -
  CGZ53_RS06295 (CGZ53_06290) - 1235337..1237334 (-) 1998 WP_046389518.1 KUP/HAK/KT family potassium transporter -

Sequence

Protein


Download         Length: 226 a.a.        Molecular weight: 25210.87 Da        Isoelectric Point: 5.2220

>NTDB_id=200708 CGZ53_RS06275 WP_012658720.1 1232614..1233294(-) (comEA/celA/cilE) [Streptococcus uberis strain NZ01]
MNDITDHIKQFLLSFKEKKLGILLAIVSLVLIICLTFFFKIKEDDKKVTLPRQMNLTENLSTTAQNDREEEKTNPEMETI
MVDIKGAVVKEGVYQLQRNSRVTDAIQIAGGLRDDADPNAINLAQKLSDEAILYVARKGENKSIIDSQGQQSSSIEQGGQ
RDQKVNINKATIEDLRKIPGIGEKRAQEILDARDSKGGFKSIDDLLTISGIGQKTLEKIKNDIIID

Nucleotide


Download         Length: 681 bp        

>NTDB_id=200708 CGZ53_RS06275 WP_012658720.1 1232614..1233294(-) (comEA/celA/cilE) [Streptococcus uberis strain NZ01]
ATGAACGATATAACAGATCACATAAAACAATTTTTGCTATCATTCAAAGAAAAGAAACTAGGTATTTTATTAGCTATTGT
TTCTTTAGTTTTGATAATATGTCTAACTTTCTTTTTTAAAATTAAAGAAGACGACAAAAAAGTTACTTTACCAAGACAAA
TGAATCTGACGGAAAATTTGTCAACTACTGCTCAAAACGATAGGGAGGAGGAAAAAACGAATCCCGAAATGGAAACCATT
ATGGTTGATATAAAAGGAGCAGTGGTAAAAGAAGGTGTTTATCAATTACAAAGAAATAGTCGTGTGACAGATGCTATTCA
GATAGCTGGAGGGTTGAGGGATGATGCTGATCCTAATGCAATAAATTTAGCACAAAAATTAAGTGACGAAGCTATCCTAT
ATGTTGCTAGAAAAGGAGAGAACAAATCAATTATTGATTCTCAGGGTCAGCAGTCATCGTCAATAGAACAGGGTGGACAA
AGGGATCAGAAGGTAAACATTAATAAAGCGACAATTGAGGACTTACGAAAGATACCTGGAATAGGTGAAAAAAGAGCGCA
AGAGATACTAGATGCTAGAGATTCAAAAGGTGGGTTTAAAAGTATTGATGACTTATTGACTATCTCTGGGATTGGGCAAA
AAACCTTGGAAAAAATTAAGAATGACATCATTATTGACTAA

Domains

Predicted by InterProScan.

SLBB domain (SLBB)

(81-129)

Helix-hairpin-helix motif (HHH_3)

(163-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB B9DUQ8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA/celA/cilE Streptococcus pneumoniae TIGR4

41.827

92.035

0.385